Gene
RNA
| Item | Value |
|---|---|
| gene id | G422335 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 60080695 ~ 60085314 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU478570 | False | 240 | lncRNA | 0.51 | 3 | 60080695 | 60085314 |
| TU478575 | True | 317 | lncRNA | 0.51 | 2 | 60082287 | 60084578 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| klf2a | LOC106613686 | coding | downstream | 99076 | 59979007 ~ 59981619 (-) |
| LOC118964630 | NA | coding | downstream | 166419 | 59904845 ~ 59914276 (-) |
| LOC110524194 | LOC106613679 | coding | downstream | 279491 | 59787744 ~ 59801204 (-) |
| LOC110524193 | LOC106613676 | coding | downstream | 304039 | 59772761 ~ 59776656 (-) |
| LOC110524192 | LOC106613675 | coding | downstream | 325876 | 59745476 ~ 59754819 (-) |
| LOC110524206 | ap1m1 | coding | upstream | 31216 | 60116530 ~ 60134272 (-) |
| LOC110524209 | LOC106613694 | coding | upstream | 197060 | 60282374 ~ 60289431 (-) |
| lpl | lpl | coding | upstream | 212890 | 60298204 ~ 60306640 (-) |
| LOC110524214 | LOC106613699 | coding | upstream | 309710 | 60395024 ~ 60398862 (-) |
| LOC118964632 | NA | coding | upstream | 328849 | 60414163 ~ 60426534 (-) |
| G422294 | NA | non-coding | downstream | 65596 | 60014867 ~ 60015099 (-) |
| G422286 | NA | non-coding | downstream | 80259 | 60000166 ~ 60000436 (-) |
| G422255 | NA | non-coding | downstream | 150181 | 59928035 ~ 59930514 (-) |
| G422254 | NA | non-coding | downstream | 158061 | 59922186 ~ 59922634 (-) |
| G422208 | calr3 | non-coding | downstream | 162805 | 59915629 ~ 59917890 (-) |
| G422342 | NA | non-coding | upstream | 9212 | 60094526 ~ 60094803 (-) |
| G422346 | NA | non-coding | upstream | 14822 | 60100136 ~ 60100372 (-) |
| G422356 | NA | non-coding | upstream | 24557 | 60109871 ~ 60110102 (-) |
| G422357 | NA | non-coding | upstream | 25362 | 60110676 ~ 60110974 (-) |
| G422359 | NA | non-coding | upstream | 26306 | 60111620 ~ 60111836 (-) |
| lsg1 | lsg1 | other | downstream | 942438 | 59131152 ~ 59138429 (-) |
| G420982 | LOC106613655 | other | downstream | 1044396 | 59026103 ~ 59036299 (-) |
| G420421 | NA | other | downstream | 1666552 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 1966635 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 2374759 | 57699745 ~ 57705936 (-) |
| G422347 | NA | other | upstream | 15451 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 973680 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 1531556 | 61616870 ~ 61617244 (-) |
| G424499 | LOC106613729 | other | upstream | 1564653 | 61649967 ~ 61651775 (-) |
| G424502 | NA | other | upstream | 1573719 | 61659033 ~ 61659585 (-) |
