G422474



Basic Information


Item Value
gene id G422474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60296174 ~ 60296487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU478721
cttttacaacatacagaagtgcgcaggttatcaaggggcaaaatattgacacgtttttttgaattgagagacgagcttaaagttgtctttactgaccatcattttcacttgtctgaccgcttgcatgatgacgagtttctcacacgactggcctatctgggtgatgtttttcctcacctgaatgatctgaatctaggattacagggactctccgcaactatattcaatgtgcatatatgtgagagtggattctcggccctcactagcatgaaaactaaatacaggcacagactgtgtggaatgtgatttaagac

Function


NR:

description
zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU478721 True 314 lncRNA 0.42 1 60296174 60296487

Neighbor


gene id symbol gene type direction distance location
LOC110524209 LOC106613694 coding downstream 6743 60282374 ~ 60289431 (-)
LOC110524206 ap1m1 coding downstream 161902 60116530 ~ 60134272 (-)
klf2a LOC106613686 coding downstream 314555 59979007 ~ 59981619 (-)
LOC118964630 NA coding downstream 381898 59904845 ~ 59914276 (-)
LOC110524194 LOC106613679 coding downstream 494970 59787744 ~ 59801204 (-)
lpl lpl coding upstream 1717 60298204 ~ 60306640 (-)
LOC110524214 LOC106613699 coding upstream 98537 60395024 ~ 60398862 (-)
LOC118964632 NA coding upstream 117676 60414163 ~ 60426534 (-)
ccl44 LOC106613702 coding upstream 163360 60459847 ~ 60462194 (-)
LOC110524218 LOC106613703 coding upstream 174825 60471312 ~ 60476448 (-)
G422471 NA non-coding downstream 2466 60293502 ~ 60293708 (-)
G422468 NA non-coding downstream 15728 60280128 ~ 60280446 (-)
G422466 NA non-coding downstream 17033 60278932 ~ 60279141 (-)
G422418 NA non-coding downstream 75960 60219892 ~ 60220214 (-)
G422415 NA non-coding downstream 78510 60217371 ~ 60217664 (-)
G422481 NA non-coding upstream 12342 60308829 ~ 60310071 (-)
G423073 NA non-coding upstream 64103 60360590 ~ 60362946 (-)
G423057 tpm4 non-coding upstream 71942 60368429 ~ 60393194 (-)
G423095 NA non-coding upstream 125397 60421884 ~ 60422186 (-)
G422347 NA other downstream 195118 60100765 ~ 60101056 (-)
lsg1 lsg1 other downstream 1157917 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 1259875 59026103 ~ 59036299 (-)
G420421 NA other downstream 1882031 58413128 ~ 58414143 (-)
G420193 NA other downstream 2182114 58112387 ~ 58114060 (-)
LOC110524239 LOC106573579 other upstream 762507 61058949 ~ 61081864 (-)
G424474 NA other upstream 1320383 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1353480 61649967 ~ 61651775 (-)
G424502 NA other upstream 1362546 61659033 ~ 61659585 (-)
G424649 NA other upstream 1591711 61888198 ~ 61927422 (-)

Expression



Co-expression Network