G422514


Basic Information

Item Value
gene id G422514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60331178 ~ 60418412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478762
tccaaacacaccaacaaaaAAACTTTTCCCCCTcagtagactgaaaagatttggcatgggtccccagatcctcaaaacgttctacagctgcaccattgagagtatcttgactggctgcatcaatgcttggtatggaaactgctctgcatccgaccgcaaggcactacagagggtagtgcgtacggcccagtacatcactggggccaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478762 True 209 lncRNA 0.50 2 60331178 60418412

Neighbor

gene id symbol gene type direction distance location
LOC118964531 NA coding upstream 63331 60223797 ~ 60267847 (+)
LOC110524208 LOC106613692 coding upstream 150904 60165608 ~ 60180274 (+)
malt2 LOC106613687 coding upstream 169244 60133236 ~ 60161934 (+)
LOC110524202 NA coding upstream 362232 59930644 ~ 59968946 (+)
LOC110524200 LOC106613684 coding upstream 400635 59920588 ~ 59930543 (+)
LOC110524215 LOC106613700 coding downstream 8698 60427110 ~ 60432323 (+)
LOC110524216 LOC106613701 coding downstream 17351 60435763 ~ 60452642 (+)
LOC110522875 NA coding downstream 61756 60480168 ~ 60484430 (+)
ctns LOC106613706 coding downstream 116121 60534533 ~ 60543487 (+)
LOC110524221 ranbp3 coding downstream 127769 60546181 ~ 60566583 (+)
G422500 NA non-coding upstream 8259 60322657 ~ 60322919 (+)
G421867 NA non-coding upstream 32612 60297185 ~ 60298566 (+)
G421862 NA non-coding upstream 120423 60210506 ~ 60210755 (+)
G421861 NA non-coding upstream 120965 60209935 ~ 60210213 (+)
G421846 NA non-coding upstream 134831 60196059 ~ 60196347 (+)
G422561 NA non-coding downstream 3019 60421431 ~ 60421644 (+)
G422562 NA non-coding downstream 3744 60422156 ~ 60422600 (+)
G422563 NA non-coding downstream 5138 60423550 ~ 60423839 (+)
G422566 NA non-coding downstream 14799 60433211 ~ 60433863 (+)
G422570 NA non-coding downstream 25900 60444312 ~ 60444602 (+)
G420634 NA other upstream 1386961 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 1914402 58411240 ~ 58418268 (+)
G419452 NA other upstream 2431530 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 2963841 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3373013 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 275845 60694220 ~ 60695905 (+)
G423922 NA other downstream 1303125 61721537 ~ 61722024 (+)
G424079 NA other downstream 1687111 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 1864740 62283054 ~ 62327772 (+)
G425224 NA other downstream 2626678 63045090 ~ 63051530 (+)

Expression


Co-expression Network