G422563


Basic Information

Item Value
gene id G422563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60423550 ~ 60423839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478814
GAGTGAGCGAAGCACAATGTTGCCTTCAATCGACTCTTGTTTTCTTGCCTGACAGACTAACTACAGAGTTTGCCAATGTTAGCTGATTAGTTACGAAGCTAGGACAGTTTCCACATGAATAGCATCGGTAGAAACAGGACAAAACAAGTAACTTTAACTTGTTAGCTGGCTATGTAAACAAATATCACTGCGCGGGCATCTACCCTAACACGACAGCTAAACTGTCAAATAATAGGAAAACGAGGCAATGTAAAGACTATGAATATCTGTACCTAGCAAACATGACAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478814 True 290 lncRNA 0.40 1 60423550 60423839

Neighbor

gene id symbol gene type direction distance location
hsh2d LOC106613697 coding upstream 12512 60407553 ~ 60411038 (+)
LOC110524213 LOC106613698 coding upstream 16102 60398990 ~ 60407448 (+)
LOC110524211 tpm4 coding upstream 28375 60368391 ~ 60395175 (+)
LOC118964531 NA coding upstream 155703 60223797 ~ 60267847 (+)
LOC110524208 LOC106613692 coding upstream 243276 60165608 ~ 60180274 (+)
LOC110524215 LOC106613700 coding downstream 3271 60427110 ~ 60432323 (+)
LOC110524216 LOC106613701 coding downstream 11924 60435763 ~ 60452642 (+)
LOC110522875 NA coding downstream 56329 60480168 ~ 60484430 (+)
ctns LOC106613706 coding downstream 110694 60534533 ~ 60543487 (+)
LOC110524221 ranbp3 coding downstream 122342 60546181 ~ 60566583 (+)
G422562 NA non-coding upstream 950 60422156 ~ 60422600 (+)
G422561 NA non-coding upstream 1906 60421431 ~ 60421644 (+)
G422514 NA non-coding upstream 5138 60331178 ~ 60418412 (+)
G422500 NA non-coding upstream 100631 60322657 ~ 60322919 (+)
G421867 NA non-coding upstream 124984 60297185 ~ 60298566 (+)
G422566 NA non-coding downstream 9372 60433211 ~ 60433863 (+)
G422570 NA non-coding downstream 20473 60444312 ~ 60444602 (+)
G422612 NA non-coding downstream 78213 60502052 ~ 60502319 (+)
G422618 NA non-coding downstream 85845 60509684 ~ 60573995 (+)
G422654 NA non-coding downstream 167632 60591471 ~ 60591691 (+)
G420634 NA other upstream 1479333 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 2006774 58411240 ~ 58418268 (+)
G419452 NA other upstream 2523902 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 3056213 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3465385 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 270418 60694220 ~ 60695905 (+)
G423922 NA other downstream 1297698 61721537 ~ 61722024 (+)
G424079 NA other downstream 1681684 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 1859313 62283054 ~ 62327772 (+)
G425224 NA other downstream 2621251 63045090 ~ 63051530 (+)

Expression


Co-expression Network