G423100



Basic Information


Item Value
gene id G423100
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60426021 ~ 60426387 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU479407
GATGTAGTCCATCAAAAATCTATCTGATTCATAAAAAGTTGCAACAGGTAACATGGAGCATAGGAAAAAGAGACAGCTTCTGACATGTAGTGCACAAAATGctaatacactgagtatacaaaacattagaaacacctgctctttccatgacagactgaccaggtgaatccaggtgaaagctatgattctttattgatgccacttgttaaatcaacttcaatcagtgtagatgaagggaaggagacaggttaaagaaggctttttaagccttgatactgttgagacatggattgtgtatgtgtgccattcagagggtaaatggtcaagttcctttgaacggggtatggtagtaggtgccaggcgcacc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU479407 True 367 lncRNA 0.41 1 60426021 60426387

Neighbor


gene id symbol gene type direction distance location
LOC110524214 LOC106613699 coding downstream 27159 60395024 ~ 60398862 (-)
lpl lpl coding downstream 119381 60298204 ~ 60306640 (-)
LOC110524209 LOC106613694 coding downstream 136590 60282374 ~ 60289431 (-)
LOC110524206 ap1m1 coding downstream 291749 60116530 ~ 60134272 (-)
klf2a LOC106613686 coding downstream 444402 59979007 ~ 59981619 (-)
ccl44 LOC106613702 coding upstream 33460 60459847 ~ 60462194 (-)
LOC110524218 LOC106613703 coding upstream 44925 60471312 ~ 60476448 (-)
LOC110524219 LOC106613704 coding upstream 83292 60509679 ~ 60513480 (-)
LOC110524222 LOC106613707 coding upstream 178821 60605208 ~ 60626475 (-)
ndufa11 LOC106613708 coding upstream 252311 60678698 ~ 60682883 (-)
G423099 NA non-coding downstream 75 60425576 ~ 60425946 (-)
G423098 NA non-coding downstream 823 60424875 ~ 60425198 (-)
G423095 NA non-coding downstream 3835 60421884 ~ 60422186 (-)
G423057 tpm4 non-coding downstream 32827 60368429 ~ 60393194 (-)
G423090 NA non-coding upstream 6953 60433340 ~ 60433586 (-)
G423102 NA non-coding upstream 9274 60435661 ~ 60436355 (-)
G423107 LOC106613701 non-coding upstream 14912 60441299 ~ 60441555 (-)
G423108 NA non-coding upstream 15329 60441716 ~ 60441960 (-)
G423110 NA non-coding upstream 15826 60442213 ~ 60442418 (-)
G422347 NA other downstream 324965 60100765 ~ 60101056 (-)
lsg1 lsg1 other downstream 1287764 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 1389722 59026103 ~ 59036299 (-)
G420421 NA other downstream 2011878 58413128 ~ 58414143 (-)
G420193 NA other downstream 2311961 58112387 ~ 58114060 (-)
LOC110524239 LOC106573579 other upstream 632607 61058949 ~ 61081864 (-)
G424474 NA other upstream 1190483 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1223580 61649967 ~ 61651775 (-)
G424502 NA other upstream 1232646 61659033 ~ 61659585 (-)
G424649 NA other upstream 1461811 61888198 ~ 61927422 (-)

Expression



Co-expression Network