Gene
RNA
| Item | Value |
|---|---|
| gene id | G422566 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 60433211 ~ 60433863 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU478817 | True | 653 | lncRNA | 0.40 | 1 | 60433211 | 60433863 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524215 | LOC106613700 | coding | upstream | 888 | 60427110 ~ 60432323 (+) |
| hsh2d | LOC106613697 | coding | upstream | 22173 | 60407553 ~ 60411038 (+) |
| LOC110524213 | LOC106613698 | coding | upstream | 25763 | 60398990 ~ 60407448 (+) |
| LOC110524211 | tpm4 | coding | upstream | 38036 | 60368391 ~ 60395175 (+) |
| LOC118964531 | NA | coding | upstream | 165364 | 60223797 ~ 60267847 (+) |
| LOC110524216 | LOC106613701 | coding | downstream | 1900 | 60435763 ~ 60452642 (+) |
| LOC110522875 | NA | coding | downstream | 46305 | 60480168 ~ 60484430 (+) |
| ctns | LOC106613706 | coding | downstream | 100670 | 60534533 ~ 60543487 (+) |
| LOC110524221 | ranbp3 | coding | downstream | 112318 | 60546181 ~ 60566583 (+) |
| LOC110524224 | LOC106613709 | coding | downstream | 256610 | 60666192 ~ 60692763 (+) |
| G422563 | NA | non-coding | upstream | 9372 | 60423550 ~ 60423839 (+) |
| G422562 | NA | non-coding | upstream | 10611 | 60422156 ~ 60422600 (+) |
| G422561 | NA | non-coding | upstream | 11567 | 60421431 ~ 60421644 (+) |
| G422514 | NA | non-coding | upstream | 14799 | 60331178 ~ 60418412 (+) |
| G422500 | NA | non-coding | upstream | 110292 | 60322657 ~ 60322919 (+) |
| G422570 | NA | non-coding | downstream | 10449 | 60444312 ~ 60444602 (+) |
| G422612 | NA | non-coding | downstream | 68189 | 60502052 ~ 60502319 (+) |
| G422618 | NA | non-coding | downstream | 75821 | 60509684 ~ 60573995 (+) |
| G422654 | NA | non-coding | downstream | 157608 | 60591471 ~ 60591691 (+) |
| G422658 | NA | non-coding | downstream | 162752 | 60596615 ~ 60596844 (+) |
| G420634 | NA | other | upstream | 1488994 | 58942728 ~ 58944217 (+) |
| G420117 | LOC100846954 | other | upstream | 2016435 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 2533563 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 3065874 | 57352343 ~ 57367627 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 3475046 | 56943838 ~ 56958165 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 260394 | 60694220 ~ 60695905 (+) |
| G423922 | NA | other | downstream | 1287674 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 1671660 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 1849289 | 62283054 ~ 62327772 (+) |
| G425224 | NA | other | downstream | 2611227 | 63045090 ~ 63051530 (+) |
