G423090



Basic Information


Item Value
gene id G423090
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60433340 ~ 60433586 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU479397
CTCTGCAGTAGACCCCCCCAAAAAGTCAGTCCCAATGAGACAAACAAAACTCTTACTGATGTCTTCATGTCAAcagactcactctctctctcatagggagaaacacacagatacaATGTGTGCGTCGCACGCACAGTTTCCTCATCAATTATTTCTCAAAAGATTTTAGCTAGCATCTCACTGAATCGACCCCCCAGCACTGTTTGtcagacatcccaaaaatcggtcttctcacgaaaactcATGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU479397 True 247 lncRNA 0.44 1 60433340 60433586

Neighbor


gene id symbol gene type direction distance location
LOC118964632 NA coding downstream 6806 60414163 ~ 60426534 (-)
LOC110524214 LOC106613699 coding downstream 34478 60395024 ~ 60398862 (-)
lpl lpl coding downstream 126700 60298204 ~ 60306640 (-)
LOC110524209 LOC106613694 coding downstream 143909 60282374 ~ 60289431 (-)
LOC110524206 ap1m1 coding downstream 299068 60116530 ~ 60134272 (-)
ccl44 LOC106613702 coding upstream 26261 60459847 ~ 60462194 (-)
LOC110524218 LOC106613703 coding upstream 37726 60471312 ~ 60476448 (-)
LOC110524219 LOC106613704 coding upstream 76093 60509679 ~ 60513480 (-)
LOC110524222 LOC106613707 coding upstream 171622 60605208 ~ 60626475 (-)
ndufa11 LOC106613708 coding upstream 245112 60678698 ~ 60682883 (-)
G423100 NA non-coding downstream 6953 60426021 ~ 60426387 (-)
G423099 NA non-coding downstream 7394 60425576 ~ 60425946 (-)
G423098 NA non-coding downstream 8142 60424875 ~ 60425198 (-)
G423095 NA non-coding downstream 11154 60421884 ~ 60422186 (-)
G423102 NA non-coding upstream 2075 60435661 ~ 60436355 (-)
G423107 LOC106613701 non-coding upstream 7713 60441299 ~ 60441555 (-)
G423108 NA non-coding upstream 8130 60441716 ~ 60441960 (-)
G423110 NA non-coding upstream 8627 60442213 ~ 60442418 (-)
G423109 LOC106613701 non-coding upstream 9753 60443339 ~ 60443564 (-)
G422347 NA other downstream 332284 60100765 ~ 60101056 (-)
lsg1 lsg1 other downstream 1295083 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 1397041 59026103 ~ 59036299 (-)
G420421 NA other downstream 2019197 58413128 ~ 58414143 (-)
G420193 NA other downstream 2319280 58112387 ~ 58114060 (-)
LOC110524239 LOC106573579 other upstream 625408 61058949 ~ 61081864 (-)
G424474 NA other upstream 1183284 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1216381 61649967 ~ 61651775 (-)
G424502 NA other upstream 1225447 61659033 ~ 61659585 (-)
G424649 NA other upstream 1454612 61888198 ~ 61927422 (-)

Expression



Co-expression Network