G423108



Basic Information


Item Value
gene id G423108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60441716 ~ 60441960 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU479415
CTGTGACCAGGCTAGAGACGATGAGAGGCAGAACCAGCATCTGCAGCATCCTCATCAGCAGCTCTCCAGGGAAGGCAAAGTACTTGATCTCCCTGAGGGTCAGGTTGTGGGGCCGCAGGGCGAAACCCAGCATgacacctggacacacacacaggggacatGATTTCAAGGCTGGTGCGCTGATGAAGAATACTGTATTTCAAGTCATCTCAACAAAGACTTCTTTACCTTGGGCTACAGCTCAT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU479415 True 245 lncRNA 0.52 1 60441716 60441960

Neighbor


gene id symbol gene type direction distance location
LOC118964632 NA coding downstream 15182 60414163 ~ 60426534 (-)
LOC110524214 LOC106613699 coding downstream 42854 60395024 ~ 60398862 (-)
lpl lpl coding downstream 135076 60298204 ~ 60306640 (-)
LOC110524209 LOC106613694 coding downstream 152285 60282374 ~ 60289431 (-)
LOC110524206 ap1m1 coding downstream 307444 60116530 ~ 60134272 (-)
ccl44 LOC106613702 coding upstream 17887 60459847 ~ 60462194 (-)
LOC110524218 LOC106613703 coding upstream 29352 60471312 ~ 60476448 (-)
LOC110524219 LOC106613704 coding upstream 67719 60509679 ~ 60513480 (-)
LOC110524222 LOC106613707 coding upstream 163248 60605208 ~ 60626475 (-)
ndufa11 LOC106613708 coding upstream 236738 60678698 ~ 60682883 (-)
G423107 LOC106613701 non-coding downstream 161 60441299 ~ 60441555 (-)
G423102 NA non-coding downstream 5361 60435661 ~ 60436355 (-)
G423090 NA non-coding downstream 8130 60433340 ~ 60433586 (-)
G423100 NA non-coding downstream 15329 60426021 ~ 60426387 (-)
G423099 NA non-coding downstream 15770 60425576 ~ 60425946 (-)
G423110 NA non-coding upstream 253 60442213 ~ 60442418 (-)
G423109 LOC106613701 non-coding upstream 1379 60443339 ~ 60443564 (-)
G423151 NA non-coding upstream 60099 60502059 ~ 60502263 (-)
G423154 NA non-coding upstream 63232 60505192 ~ 60507727 (-)
G423155 NA non-coding upstream 63702 60505662 ~ 60566413 (-)
G422347 NA other downstream 340660 60100765 ~ 60101056 (-)
lsg1 lsg1 other downstream 1303459 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 1405417 59026103 ~ 59036299 (-)
G420421 NA other downstream 2027573 58413128 ~ 58414143 (-)
G420193 NA other downstream 2327656 58112387 ~ 58114060 (-)
LOC110524239 LOC106573579 other upstream 617034 61058949 ~ 61081864 (-)
G424474 NA other upstream 1174910 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1208007 61649967 ~ 61651775 (-)
G424502 NA other upstream 1217073 61659033 ~ 61659585 (-)
G424649 NA other upstream 1446238 61888198 ~ 61927422 (-)

Expression



Co-expression Network