G422570


Basic Information

Item Value
gene id G422570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60444312 ~ 60444602 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478821
cctttaaacagcttggaaaagtcgagaaaataatgtcatggctttagaagcttctgataggctaattgacatattttgagtaaattggaggtctacctgtggatgtatttcaaggcctaccttcaaactctgcctctttgcttgacatcattggaaaatcaaaagatatcagccaaaacctcagaaaataaattgtagacctccacatgtctggttcatccttgggagcaatatccaaacgcctgaaggaacCACGTTTATcgatacaaacaatagtatgcaagtataaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478821 True 291 lncRNA 0.38 1 60444312 60444602

Neighbor

gene id symbol gene type direction distance location
LOC110524215 LOC106613700 coding upstream 11989 60427110 ~ 60432323 (+)
hsh2d LOC106613697 coding upstream 33274 60407553 ~ 60411038 (+)
LOC110524213 LOC106613698 coding upstream 36864 60398990 ~ 60407448 (+)
LOC110524211 tpm4 coding upstream 49137 60368391 ~ 60395175 (+)
LOC118964531 NA coding upstream 176465 60223797 ~ 60267847 (+)
LOC110522875 NA coding downstream 35566 60480168 ~ 60484430 (+)
ctns LOC106613706 coding downstream 89931 60534533 ~ 60543487 (+)
LOC110524221 ranbp3 coding downstream 101579 60546181 ~ 60566583 (+)
LOC110524224 LOC106613709 coding downstream 245871 60666192 ~ 60692763 (+)
LOC110524226 LOC106573564 coding downstream 249618 60694220 ~ 60695905 (+)
G422566 NA non-coding upstream 10449 60433211 ~ 60433863 (+)
G422563 NA non-coding upstream 20473 60423550 ~ 60423839 (+)
G422562 NA non-coding upstream 21712 60422156 ~ 60422600 (+)
G422561 NA non-coding upstream 22668 60421431 ~ 60421644 (+)
G422514 NA non-coding upstream 25900 60331178 ~ 60418412 (+)
G422612 NA non-coding downstream 57450 60502052 ~ 60502319 (+)
G422618 NA non-coding downstream 65082 60509684 ~ 60573995 (+)
G422654 NA non-coding downstream 146869 60591471 ~ 60591691 (+)
G422658 NA non-coding downstream 152013 60596615 ~ 60596844 (+)
G422659 NA non-coding downstream 152421 60597023 ~ 60597372 (+)
G420634 NA other upstream 1500095 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 2027536 58411240 ~ 58418268 (+)
G419452 NA other upstream 2544664 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 3076975 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3486147 56943838 ~ 56958165 (+)
G423922 NA other downstream 1276935 61721537 ~ 61722024 (+)
G424079 NA other downstream 1660921 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 1838550 62283054 ~ 62327772 (+)
G425224 NA other downstream 2600488 63045090 ~ 63051530 (+)

Expression


Co-expression Network