G422612


Basic Information

Item Value
gene id G422612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60502052 ~ 60502319 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478871
tcaaaaGGAAGGAAaattgtgtatatattgaagcaacatctgaaaaCATCAGCCAGAcacttaaagcttggtcgcaaatgggtcttccaaatggacaatgatcccaagcatacttccaaagttgtggcaaaacggcttaaggacaacaaagtcaatgtattggagtggccatcacaaagccctgaccttaatcctatagataatttgtgggcagaactgaaaaagcgtgtgcgagcaaggaggcctacaaacctgactcagttacacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478871 True 268 lncRNA 0.43 1 60502052 60502319

Neighbor

gene id symbol gene type direction distance location
LOC110522875 NA coding upstream 17622 60480168 ~ 60484430 (+)
LOC110524216 LOC106613701 coding upstream 49410 60435763 ~ 60452642 (+)
LOC110524215 LOC106613700 coding upstream 69729 60427110 ~ 60432323 (+)
hsh2d LOC106613697 coding upstream 91014 60407553 ~ 60411038 (+)
LOC110524213 LOC106613698 coding upstream 94604 60398990 ~ 60407448 (+)
ctns LOC106613706 coding downstream 32214 60534533 ~ 60543487 (+)
LOC110524221 ranbp3 coding downstream 43862 60546181 ~ 60566583 (+)
LOC110524224 LOC106613709 coding downstream 188154 60666192 ~ 60692763 (+)
LOC110524226 LOC106573564 coding downstream 191901 60694220 ~ 60695905 (+)
LOC110524227 fbn3 coding downstream 268437 60770756 ~ 60861371 (+)
G422570 NA non-coding upstream 57450 60444312 ~ 60444602 (+)
G422566 NA non-coding upstream 68189 60433211 ~ 60433863 (+)
G422563 NA non-coding upstream 78213 60423550 ~ 60423839 (+)
G422562 NA non-coding upstream 79452 60422156 ~ 60422600 (+)
G422561 NA non-coding upstream 80408 60421431 ~ 60421644 (+)
G422618 NA non-coding downstream 7365 60509684 ~ 60573995 (+)
G422654 NA non-coding downstream 89152 60591471 ~ 60591691 (+)
G422658 NA non-coding downstream 94296 60596615 ~ 60596844 (+)
G422659 NA non-coding downstream 94704 60597023 ~ 60597372 (+)
G422674 NA non-coding downstream 123171 60625490 ~ 60625880 (+)
G420634 NA other upstream 1557835 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 2085276 58411240 ~ 58418268 (+)
G419452 NA other upstream 2602404 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 3134715 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3543887 56943838 ~ 56958165 (+)
G423922 NA other downstream 1219218 61721537 ~ 61722024 (+)
G424079 NA other downstream 1603204 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 1780833 62283054 ~ 62327772 (+)
G425224 NA other downstream 2542771 63045090 ~ 63051530 (+)

Expression


Co-expression Network