G423155


Basic Information

Item Value
gene id G423155
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60505662 ~ 60566413 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU479466
acatGAAAGGCTTGTAGTACATGAAAAAGGATGACACTATAATACAACAGTTTAGAGATATGACTAATTCCACTGATATGAAGAAAGGCTTAAAACAAGAGGAGCCACACTTCACTGAAGGAAATATAACTGCAGTCATCTATTCTCATAGGGGATCCGTTTTAAATACACCAAACCAAAGCCACCGATTAACAGTGGAATAAAGAGGGCTCAGCACCCAGACGATTGGTGAGAAACAATGTACTTGTAGTCTTCCAATCATGTGCGTGTAGAACCACCTGTTCCAATGCCTATAGCTCTTTGAATTAAAATGGCAGCATTAGTTGTTCTGAGAGTATATGTGCATTTTGTAGGGTTTTGAGGTCAAACCCATTTAGGATAGATGCAAATAACGACATctgtctcttaggagggtcacctatctagggacgctaaggaggtggacaaagactattatggagtggggtccacgtcca
>TU479465
acatGAAAGGCTTGTAGTACATGAAAAAGGATGACACTATAATACAACAGTTTAGAGATATGACTAATTCCACTGATATGAAGAAAGGCTTAAAACAAGAGGAGCCACACTTCACTGAAGGAAATATAACTGCAGTCATCTATTCTCATAGGGGATCCGTTTTAAATACACCAAACCAAAGCCACCGATTAACAGTGGAATAAAGAGGGCTCAGCACCCAGACGATTGGTGAGAAACAATGTACTTGTAGTCTTCCAATCATGTGCGTGTAGAACCACCTGTTCCAATGCCTATAGCTCTTTGAATTAAAATGGCAGCATTAGTTGTTCTGAGAGTATATGTGCATTTTGTAGGGTTTTGAGGTCAAACCCATTTAGGATAGATGCAAATAACGACATGTTCGGAGAATCCAACTGCCAACACCCAAACCTAGAAGTTATTATATTGACCTTTCTCATGGTGTGAAAAAACATAGGAAAAATATGTTCACAATGATCGAGGTTGTTATAAACAATGTCTGTGTAACTTATTTAAAGCAAACTAAATAAACAATTGTAAACAACTAATAAAATTGGTTTATTCAATATATATTTGGGAAGATGATATCTTTTCAGATCCATCTAAAAATGCTTTATCTTTTTGAAACAAACACATCTACCATCTATATTTAGGGACAATTTTGGGGTCATGGGAAAAAAACCTGCTGTAAAACTATCAAATCCAGCTAGCTTATTTGCAAAATGGGTTCATTTTCAAATGAACTTCAAAATCAAAGTCGATATATCAACtatcaataataataatcatcataatAATGAACACAGGTCAACTCCATTATTAAAAGCAGGTGTTTGCACAAGGGCTTCGATTTCAAATGATTTGTGGTCAAAAATAATTTATAATGTTGACTACAGACTAAAAAACTAAGTGGCCAAAGGCGGTATCGACGGacttaaaatacaaaataaaacttGGAGAGTTCAGACACAACTCTGAAAGAAGACTTTATAAACTATTATTTGCTAGGCAACTAGATCTTTACCTCTCTGAACAAAATACAAGCCCCACTGGATTTGAAGTGCCTGAGGTCTGTTTTCTTGCAAGGTGGATAAAGAGGTCCCACTTTTAACGGCAAGCTCTTTAGAATGTACTTACATCGGCGAGAGAAGAAAACCGCTTTCTCATTCCGTCTTGCAACGTCTCACTCATCAATATGATGAGCGACAATTCACAAactccaaaaaatatatatttttcagttcTATAGGTTAAAAAAacgaaaataaaaaaacaaacaaaaagaccATCCATCCCGGATATACTGCAAATGCAGAGAGACTGAACTGCACAGAGTTAAGTTAGTAGCACCTGCATAGGATCCTTCCTGGTACTCCACTGTGACCTCTGACCATTGGGGAAATGCTGGACTGAGGTGCCTGTAGGGGTCCTGACTGCAGCGTGTGGAGGGGGGCAGGCGCTATGAGGACCCACTCCCGCTGGCCTGGACCTCTGGAC

Function

NR:

description
Ran-binding protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU479466 False 476 lncRNA 0.41 2 60505662 60566413
TU479465 True 1515 lncRNA 0.38 2 60564869 60566413

Neighbor

gene id symbol gene type direction distance location
LOC110524218 LOC106613703 coding downstream 29214 60471312 ~ 60476448 (-)
ccl44 LOC106613702 coding downstream 43468 60459847 ~ 60462194 (-)
LOC118964632 NA coding downstream 79128 60414163 ~ 60426534 (-)
LOC110524214 LOC106613699 coding downstream 106800 60395024 ~ 60398862 (-)
lpl lpl coding downstream 199022 60298204 ~ 60306640 (-)
LOC110524222 LOC106613707 coding upstream 38795 60605208 ~ 60626475 (-)
ndufa11 LOC106613708 coding upstream 112285 60678698 ~ 60682883 (-)
cers4a LOC106613711 coding upstream 129490 60695903 ~ 60728972 (-)
LOC110524228 LOC106573568 coding upstream 295034 60861447 ~ 60884008 (-)
timm44 LOC106613715 coding upstream 335985 60902398 ~ 60914281 (-)
G423151 NA non-coding downstream 3399 60502059 ~ 60502263 (-)
G423109 LOC106613701 non-coding downstream 62098 60443339 ~ 60443564 (-)
G423110 NA non-coding downstream 63244 60442213 ~ 60442418 (-)
G423108 NA non-coding downstream 63702 60441716 ~ 60441960 (-)
G423107 LOC106613701 non-coding downstream 64107 60441299 ~ 60441555 (-)
G423200 NA non-coding upstream 26202 60592615 ~ 60592825 (-)
G423202 NA non-coding upstream 27490 60593903 ~ 60594197 (-)
G423205 NA non-coding upstream 29602 60596015 ~ 60596282 (-)
G423230 NA non-coding upstream 60976 60627389 ~ 60627595 (-)
G423246 NA non-coding upstream 84959 60651372 ~ 60652062 (-)
G422347 NA other downstream 404606 60100765 ~ 60101056 (-)
lsg1 lsg1 other downstream 1367405 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 1469363 59026103 ~ 59036299 (-)
G420421 NA other downstream 2091519 58413128 ~ 58414143 (-)
G420193 NA other downstream 2391602 58112387 ~ 58114060 (-)
LOC110524239 LOC106573579 other upstream 492581 61058949 ~ 61081864 (-)
G424474 NA other upstream 1050457 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1083554 61649967 ~ 61651775 (-)
G424502 NA other upstream 1092620 61659033 ~ 61659585 (-)
G424649 NA other upstream 1321785 61888198 ~ 61927422 (-)

Expression


Co-expression Network