G422658


Basic Information

Item Value
gene id G422658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60596615 ~ 60596844 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478922
tataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggaccactgcaaatctaccaagacctggccgtccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU478922 True 230 lncRNA 0.45 1 60596615 60596844

Neighbor

gene id symbol gene type direction distance location
LOC110524221 ranbp3 coding upstream 30032 60546181 ~ 60566583 (+)
ctns LOC106613706 coding upstream 53128 60534533 ~ 60543487 (+)
LOC110522875 NA coding upstream 112185 60480168 ~ 60484430 (+)
LOC110524216 LOC106613701 coding upstream 143973 60435763 ~ 60452642 (+)
LOC110524215 LOC106613700 coding upstream 164292 60427110 ~ 60432323 (+)
LOC110524224 LOC106613709 coding downstream 93629 60666192 ~ 60692763 (+)
LOC110524226 LOC106573564 coding downstream 97376 60694220 ~ 60695905 (+)
LOC110524227 fbn3 coding downstream 173912 60770756 ~ 60861371 (+)
LOC110524234 LOC106613716 coding downstream 342486 60939330 ~ 60942382 (+)
LOC118964633 polr2e coding downstream 480660 61077504 ~ 61081007 (+)
G422654 NA non-coding upstream 4924 60591471 ~ 60591691 (+)
G422618 NA non-coding upstream 22620 60509684 ~ 60573995 (+)
G422612 NA non-coding upstream 94296 60502052 ~ 60502319 (+)
G422570 NA non-coding upstream 152013 60444312 ~ 60444602 (+)
G422566 NA non-coding upstream 162752 60433211 ~ 60433863 (+)
G422659 NA non-coding downstream 179 60597023 ~ 60597372 (+)
G422674 NA non-coding downstream 28646 60625490 ~ 60625880 (+)
G422675 NA non-coding downstream 29109 60625953 ~ 60626221 (+)
G422679 NA non-coding downstream 33392 60630236 ~ 60630441 (+)
G422705 NA non-coding downstream 65517 60662361 ~ 60662688 (+)
G420634 NA other upstream 1652398 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 2179839 58411240 ~ 58418268 (+)
G419452 NA other upstream 2696967 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 3229278 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3638450 56943838 ~ 56958165 (+)
G423922 NA other downstream 1124693 61721537 ~ 61722024 (+)
G424079 NA other downstream 1508679 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 1686308 62283054 ~ 62327772 (+)
G425224 NA other downstream 2448246 63045090 ~ 63051530 (+)

Expression


Co-expression Network