G422674


Basic Information

Item Value
gene id G422674
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60625490 ~ 60625880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478938
GTGTTAGGTCAGATACAGTCTTGTAAAGGTATAAAAAACACAATGCCTGAGGTGTAGAGTTGTTCCCTCCAGATGACTCTTCCCCCCCCTTCACACACAGCCAGACTGTCAGAATGCTGAAGGAGACCTGACAGACTCCCCGAGAGAGAACCAGCCCTGGAAATCCAGCACCTCTTATGGTAATAAATAATCAGTCCACAGCTCCCATACACCAACACTGTGTTTCAAAGAAAAGCAAACGTGGAAAACAACATCAATTCTCTAGAAATCTCCTGCAGTGCGTTGTTAAATAAACATCATGCTATTTACGCAGGACTGAAATATGGTCAAATCTCATGAGAGTACTTTTAAAAAAACTCCAAGATCCAGATGAGTTCAGTCTGTCCATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478938 True 391 lncRNA 0.43 1 60625490 60625880

Neighbor

gene id symbol gene type direction distance location
LOC110524221 ranbp3 coding upstream 58907 60546181 ~ 60566583 (+)
ctns LOC106613706 coding upstream 82003 60534533 ~ 60543487 (+)
LOC110522875 NA coding upstream 141060 60480168 ~ 60484430 (+)
LOC110524216 LOC106613701 coding upstream 172848 60435763 ~ 60452642 (+)
LOC110524215 LOC106613700 coding upstream 193167 60427110 ~ 60432323 (+)
LOC110524224 LOC106613709 coding downstream 64593 60666192 ~ 60692763 (+)
LOC110524226 LOC106573564 coding downstream 68340 60694220 ~ 60695905 (+)
LOC110524227 fbn3 coding downstream 144876 60770756 ~ 60861371 (+)
LOC110524234 LOC106613716 coding downstream 313450 60939330 ~ 60942382 (+)
LOC118964633 polr2e coding downstream 451624 61077504 ~ 61081007 (+)
G422659 NA non-coding upstream 28118 60597023 ~ 60597372 (+)
G422658 NA non-coding upstream 28646 60596615 ~ 60596844 (+)
G422654 NA non-coding upstream 33799 60591471 ~ 60591691 (+)
G422618 NA non-coding upstream 51495 60509684 ~ 60573995 (+)
G422612 NA non-coding upstream 123171 60502052 ~ 60502319 (+)
G422675 NA non-coding downstream 73 60625953 ~ 60626221 (+)
G422679 NA non-coding downstream 4356 60630236 ~ 60630441 (+)
G422705 NA non-coding downstream 36481 60662361 ~ 60662688 (+)
G422717 LOC106613708 non-coding downstream 52786 60678666 ~ 60682745 (+)
G420634 NA other upstream 1681273 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 2208714 58411240 ~ 58418268 (+)
G419452 NA other upstream 2725842 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 3258153 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3667325 56943838 ~ 56958165 (+)
G423922 NA other downstream 1095657 61721537 ~ 61722024 (+)
G424079 NA other downstream 1479643 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 1657272 62283054 ~ 62327772 (+)
G425224 NA other downstream 2419210 63045090 ~ 63051530 (+)

Expression


Co-expression Network