G422679


Basic Information

Item Value
gene id G422679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60630236 ~ 60630441 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478943
gttctgggaaggctttgcTGCGTGACTTGCTTCCAACATTGctgggggacttgcttccattcagccacaaaagcattagtgaggtcgggcgcagatgttgggcgattaggcctggctcgcagttggcgttccatttcatcccaaaggtgttcaatggggttgaggtctgggctctgtgcaggccaatcttccacaccgatctcgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478943 True 206 lncRNA 0.55 1 60630236 60630441

Neighbor

gene id symbol gene type direction distance location
LOC110524221 ranbp3 coding upstream 63653 60546181 ~ 60566583 (+)
ctns LOC106613706 coding upstream 86749 60534533 ~ 60543487 (+)
LOC110522875 NA coding upstream 145806 60480168 ~ 60484430 (+)
LOC110524216 LOC106613701 coding upstream 177594 60435763 ~ 60452642 (+)
LOC110524215 LOC106613700 coding upstream 197913 60427110 ~ 60432323 (+)
LOC110524224 LOC106613709 coding downstream 60032 60666192 ~ 60692763 (+)
LOC110524226 LOC106573564 coding downstream 63779 60694220 ~ 60695905 (+)
LOC110524227 fbn3 coding downstream 140315 60770756 ~ 60861371 (+)
LOC110524234 LOC106613716 coding downstream 308889 60939330 ~ 60942382 (+)
LOC118964633 polr2e coding downstream 447063 61077504 ~ 61081007 (+)
G422675 NA non-coding upstream 4015 60625953 ~ 60626221 (+)
G422674 NA non-coding upstream 4356 60625490 ~ 60625880 (+)
G422659 NA non-coding upstream 32864 60597023 ~ 60597372 (+)
G422658 NA non-coding upstream 33392 60596615 ~ 60596844 (+)
G422654 NA non-coding upstream 38545 60591471 ~ 60591691 (+)
G422705 NA non-coding downstream 31920 60662361 ~ 60662688 (+)
G422717 LOC106613708 non-coding downstream 48225 60678666 ~ 60682745 (+)
G422720 NA non-coding downstream 63417 60693858 ~ 60694107 (+)
G422701 NA non-coding downstream 69602 60700043 ~ 60704580 (+)
G420634 NA other upstream 1686019 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 2213460 58411240 ~ 58418268 (+)
G419452 NA other upstream 2730588 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 3262899 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3672071 56943838 ~ 56958165 (+)
G423922 NA other downstream 1091096 61721537 ~ 61722024 (+)
G424079 NA other downstream 1475082 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 1652711 62283054 ~ 62327772 (+)
G425224 NA other downstream 2414649 63045090 ~ 63051530 (+)

Expression


Co-expression Network