Gene
RNA
| Item | Value |
|---|---|
| gene id | G422705 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 60662361 ~ 60662688 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU478970 | True | 328 | lncRNA | 0.38 | 1 | 60662361 | 60662688 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524221 | ranbp3 | coding | upstream | 95778 | 60546181 ~ 60566583 (+) |
| ctns | LOC106613706 | coding | upstream | 118874 | 60534533 ~ 60543487 (+) |
| LOC110522875 | NA | coding | upstream | 177931 | 60480168 ~ 60484430 (+) |
| LOC110524216 | LOC106613701 | coding | upstream | 209719 | 60435763 ~ 60452642 (+) |
| LOC110524215 | LOC106613700 | coding | upstream | 230038 | 60427110 ~ 60432323 (+) |
| LOC110524224 | LOC106613709 | coding | downstream | 27785 | 60666192 ~ 60692763 (+) |
| LOC110524226 | LOC106573564 | coding | downstream | 31532 | 60694220 ~ 60695905 (+) |
| LOC110524227 | fbn3 | coding | downstream | 108068 | 60770756 ~ 60861371 (+) |
| LOC110524234 | LOC106613716 | coding | downstream | 276642 | 60939330 ~ 60942382 (+) |
| LOC118964633 | polr2e | coding | downstream | 414816 | 61077504 ~ 61081007 (+) |
| G422679 | NA | non-coding | upstream | 31920 | 60630236 ~ 60630441 (+) |
| G422675 | NA | non-coding | upstream | 36140 | 60625953 ~ 60626221 (+) |
| G422674 | NA | non-coding | upstream | 36481 | 60625490 ~ 60625880 (+) |
| G422659 | NA | non-coding | upstream | 64989 | 60597023 ~ 60597372 (+) |
| G422658 | NA | non-coding | upstream | 65517 | 60596615 ~ 60596844 (+) |
| G422717 | LOC106613708 | non-coding | downstream | 15978 | 60678666 ~ 60682745 (+) |
| G422720 | NA | non-coding | downstream | 31170 | 60693858 ~ 60694107 (+) |
| G422701 | NA | non-coding | downstream | 37355 | 60700043 ~ 60704580 (+) |
| G420634 | NA | other | upstream | 1718144 | 58942728 ~ 58944217 (+) |
| G420117 | LOC100846954 | other | upstream | 2245585 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 2762713 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 3295024 | 57352343 ~ 57367627 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 3704196 | 56943838 ~ 56958165 (+) |
| G423922 | NA | other | downstream | 1058849 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 1442835 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 1620464 | 62283054 ~ 62327772 (+) |
| G425224 | NA | other | downstream | 2382402 | 63045090 ~ 63051530 (+) |
