G423360



Basic Information


Item Value
gene id G423360
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60855260 ~ 60855923 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU479690
CAGGCGGTTTGGTGCTGGGTGAAGCCTGCGGGACACTTGCAGGTAAAACCGCCGATGGTGTTGACACACAGGAACTGACAGTTGTGCTGCTTGGTGGAACACTCATCCAGATCTGGAGTAGAAATATGGATGTGTTGATAAACGGTGAAGAAAGCAAGTATACTGGATGTCATTGAAAGTACCAGTTGGCATGTTAGACAATTCAGATAGAGGGATCATGTGGGAACTCGTGTTTCAGTATTTATCGGACTGGTCTTGAAGGCTGTGCGTGTGGCCAGGAGCAGGGTCCCCCCACCTTTGCAGGTCTTTCCGTCAGGCTGCATAGTGTATCCTCTGGGGCAGGAGCACAGGTAGCTGCCCTCTGTGTTCTTACACAGGAAGTTACAGGGCTTGGGAGACGCGGAACACTCATCCATATCTGAAACGCCACAGACAGTGGTGAGTAATAAGGTCAGAATGAGAGCAATTTCTACCCCGCAGCCAGGACGGTTTGGTCCAAGGCccggtaagagagagagagagagagagatgggtcatACCAATGCAGGAGGTGCTGGTGAAGTCGGTGGTATAACCCACGTTGCAGTGGCAGCGGAACGATCCGATGGTGTTGATGCACTGGCCGTTCTTACACAGGTCTGGCATCACCGTGCACTCATTGATG

Function


NR:

description
LOW QUALITY PROTEIN: fibrillin-2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU479690 True 664 lncRNA 0.52 1 60855260 60855923

Neighbor


gene id symbol gene type direction distance location
cers4a LOC106613711 coding downstream 126288 60695903 ~ 60728972 (-)
ndufa11 LOC106613708 coding downstream 172377 60678698 ~ 60682883 (-)
LOC110524222 LOC106613707 coding downstream 228785 60605208 ~ 60626475 (-)
LOC110524219 LOC106613704 coding downstream 341780 60509679 ~ 60513480 (-)
LOC110524218 LOC106613703 coding downstream 378812 60471312 ~ 60476448 (-)
LOC110524228 LOC106573568 coding upstream 5524 60861447 ~ 60884008 (-)
timm44 LOC106613715 coding upstream 46475 60902398 ~ 60914281 (-)
LOC110524230 hnrpm coding upstream 59094 60915017 ~ 60930663 (-)
LOC110524231 LOC106613717 coding upstream 88084 60944007 ~ 60951642 (-)
LOC110524236 rb11b coding upstream 96982 60952905 ~ 60966146 (-)
G423361 NA non-coding downstream 145 60854583 ~ 60855115 (-)
G423365 NA non-coding downstream 2772 60852156 ~ 60852488 (-)
G423364 NA non-coding downstream 3561 60851103 ~ 60851699 (-)
G423363 NA non-coding downstream 7896 60846910 ~ 60847364 (-)
G423357 NA non-coding downstream 14212 60840630 ~ 60841048 (-)
G423384 NA non-coding upstream 45593 60901516 ~ 60901755 (-)
G423391 NA non-coding upstream 76876 60932799 ~ 60933048 (-)
G423394 NA non-coding upstream 81077 60937000 ~ 60937221 (-)
LOC110524237 LOC106613718 non-coding upstream 110586 60966400 ~ 60970979 (-)
G422347 NA other downstream 754204 60100765 ~ 60101056 (-)
lsg1 lsg1 other downstream 1717003 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 1818961 59026103 ~ 59036299 (-)
G420421 NA other downstream 2441117 58413128 ~ 58414143 (-)
G420193 NA other downstream 2741200 58112387 ~ 58114060 (-)
LOC110524239 LOC106573579 other upstream 203071 61058949 ~ 61081864 (-)
G424474 NA other upstream 760947 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 794044 61649967 ~ 61651775 (-)
G424502 NA other upstream 803110 61659033 ~ 61659585 (-)
G424649 NA other upstream 1032275 61888198 ~ 61927422 (-)

Expression



Co-expression Network