G423394



Basic Information


Item Value
gene id G423394
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60937000 ~ 60937221 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU479724
gtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgtcaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaagcaGCCCTGTCCAAGCGATAATattaaaatggaaggagtatcagac

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU479724 True 222 lncRNA 0.44 1 60937000 60937221

Neighbor


gene id symbol gene type direction distance location
LOC110524230 hnrpm coding downstream 6337 60915017 ~ 60930663 (-)
timm44 LOC106613715 coding downstream 22719 60902398 ~ 60914281 (-)
LOC110524228 LOC106573568 coding downstream 52992 60861447 ~ 60884008 (-)
cers4a LOC106613711 coding downstream 208028 60695903 ~ 60728972 (-)
ndufa11 LOC106613708 coding downstream 254117 60678698 ~ 60682883 (-)
LOC110524231 LOC106613717 coding upstream 6786 60944007 ~ 60951642 (-)
LOC110524236 rb11b coding upstream 15684 60952905 ~ 60966146 (-)
LOC110524237 LOC106613718 coding upstream 29179 60966400 ~ 60970979 (-)
pip5k1ca LOC106613719 coding upstream 35922 60973143 ~ 61053401 (-)
LOC110524239 LOC106573579 coding upstream 121728 61058949 ~ 61081864 (-)
G423391 NA non-coding downstream 3952 60932799 ~ 60933048 (-)
G423384 NA non-coding downstream 35245 60901516 ~ 60901755 (-)
G423360 NA non-coding downstream 81077 60855260 ~ 60855923 (-)
G423361 NA non-coding downstream 81885 60854583 ~ 60855115 (-)
G423435 NA non-coding upstream 94050 61031271 ~ 61093488 (-)
G423495 NA non-coding upstream 309337 61246558 ~ 61246791 (-)
G423497 NA non-coding upstream 311347 61248568 ~ 61248887 (-)
G423509 tm6s1 non-coding upstream 326670 61263891 ~ 61265340 (-)
G422347 NA other downstream 835944 60100765 ~ 60101056 (-)
lsg1 lsg1 other downstream 1798743 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 1900701 59026103 ~ 59036299 (-)
G420421 NA other downstream 2522857 58413128 ~ 58414143 (-)
G420193 NA other downstream 2822940 58112387 ~ 58114060 (-)
G424474 NA other upstream 679649 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 712746 61649967 ~ 61651775 (-)
G424502 NA other upstream 721812 61659033 ~ 61659585 (-)
G424649 NA other upstream 950977 61888198 ~ 61927422 (-)

Expression



Co-expression Network