Gene
RNA
| Item | Value |
|---|---|
| gene id | G422843 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 60938291 ~ 60938505 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU479115 | True | 215 | lncRNA | 0.37 | 1 | 60938291 | 60938505 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524227 | fbn3 | coding | upstream | 76920 | 60770756 ~ 60861371 (+) |
| LOC110524226 | LOC106573564 | coding | upstream | 242387 | 60694220 ~ 60695905 (+) |
| LOC110524224 | LOC106613709 | coding | upstream | 245528 | 60666192 ~ 60692763 (+) |
| LOC110524221 | ranbp3 | coding | upstream | 371708 | 60546181 ~ 60566583 (+) |
| ctns | LOC106613706 | coding | upstream | 394804 | 60534533 ~ 60543487 (+) |
| LOC110524234 | LOC106613716 | coding | downstream | 825 | 60939330 ~ 60942382 (+) |
| LOC118964633 | polr2e | coding | downstream | 138999 | 61077504 ~ 61081007 (+) |
| tm6sf2 | tm6s1 | coding | downstream | 310067 | 61248572 ~ 61265206 (+) |
| hapln4 | hapln4 | coding | downstream | 328710 | 61267215 ~ 61285666 (+) |
| nr2c2ap | nr2c2ap | coding | downstream | 652098 | 61590603 ~ 61599332 (+) |
| G422841 | NA | non-coding | upstream | 7014 | 60930972 ~ 60931277 (+) |
| G422838 | NA | non-coding | upstream | 11306 | 60924263 ~ 60926985 (+) |
| G422814 | NA | non-coding | upstream | 47843 | 60890178 ~ 60890448 (+) |
| G422811 | NA | non-coding | upstream | 48301 | 60887584 ~ 60889990 (+) |
| G422845 | LOC106613717 | non-coding | downstream | 9798 | 60948303 ~ 60949300 (+) |
| G422856 | NA | non-coding | downstream | 30889 | 60969394 ~ 60969655 (+) |
| G422860 | NA | non-coding | downstream | 33132 | 60971637 ~ 60971903 (+) |
| G422861 | NA | non-coding | downstream | 33452 | 60971957 ~ 60972184 (+) |
| G422858 | NA | non-coding | downstream | 39507 | 60978012 ~ 60988260 (+) |
| G420634 | NA | other | upstream | 1994074 | 58942728 ~ 58944217 (+) |
| G420117 | LOC100846954 | other | upstream | 2521515 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 3038643 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 3570954 | 57352343 ~ 57367627 (+) |
| G423922 | NA | other | downstream | 783032 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 1167018 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 1344647 | 62283054 ~ 62327772 (+) |
| G425224 | NA | other | downstream | 2106585 | 63045090 ~ 63051530 (+) |
| nfil3-4 | LOC106614010 | other | downstream | 2737909 | 63676409 ~ 63684848 (+) |
