Gene
RNA
| Item | Value |
|---|---|
| gene id | G422978 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 61161197 ~ 61191465 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU479279 | True | 259 | lncRNA | 0.53 | 2 | 61161197 | 61191465 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964633 | polr2e | coding | upstream | 80190 | 61077504 ~ 61081007 (+) |
| LOC110524234 | LOC106613716 | coding | upstream | 218815 | 60939330 ~ 60942382 (+) |
| LOC110524227 | fbn3 | coding | upstream | 299826 | 60770756 ~ 60861371 (+) |
| LOC110524226 | LOC106573564 | coding | upstream | 465293 | 60694220 ~ 60695905 (+) |
| LOC110524224 | LOC106613709 | coding | upstream | 468434 | 60666192 ~ 60692763 (+) |
| tm6sf2 | tm6s1 | coding | downstream | 57107 | 61248572 ~ 61265206 (+) |
| hapln4 | hapln4 | coding | downstream | 75750 | 61267215 ~ 61285666 (+) |
| nr2c2ap | nr2c2ap | coding | downstream | 399138 | 61590603 ~ 61599332 (+) |
| LOC110524248 | LOC106613729 | coding | downstream | 445639 | 61637104 ~ 61655195 (+) |
| LOC110524251 | LOC106613732 | coding | downstream | 594982 | 61786447 ~ 61793643 (+) |
| G422951 | NA | non-coding | upstream | 54255 | 61106216 ~ 61106942 (+) |
| G422886 | NA | non-coding | upstream | 146251 | 61013149 ~ 61014946 (+) |
| G422858 | NA | non-coding | upstream | 172937 | 60978012 ~ 60988260 (+) |
| G422861 | NA | non-coding | upstream | 189013 | 60971957 ~ 60972184 (+) |
| G422860 | NA | non-coding | upstream | 189294 | 60971637 ~ 60971903 (+) |
| G423541 | NA | non-coding | downstream | 98309 | 61289774 ~ 61290244 (+) |
| G423548 | NA | non-coding | downstream | 108175 | 61299640 ~ 61345067 (+) |
| G423600 | NA | non-coding | downstream | 214612 | 61406077 ~ 61472572 (+) |
| G423629 | LOC106613725 | non-coding | downstream | 251644 | 61443109 ~ 61443960 (+) |
| G423796 | NA | non-coding | downstream | 338436 | 61529901 ~ 61530115 (+) |
| G420634 | NA | other | upstream | 2216980 | 58942728 ~ 58944217 (+) |
| G420117 | LOC100846954 | other | upstream | 2744421 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 3261549 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 3793860 | 57352343 ~ 57367627 (+) |
| G423922 | NA | other | downstream | 530072 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 914058 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 1091687 | 62283054 ~ 62327772 (+) |
| G425224 | NA | other | downstream | 1853625 | 63045090 ~ 63051530 (+) |
| nfil3-4 | LOC106614010 | other | downstream | 2484949 | 63676409 ~ 63684848 (+) |
