Gene
RNA
| Item | Value |
|---|---|
| gene id | G423509 |
| gene name | tm6s1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 61263891 ~ 61265340 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane 6 superfamily member 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU479849 | True | 667 | lncRNA | 0.48 | 2 | 61263891 | 61265340 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524243 | LOC106613723 | coding | downstream | 21885 | 61139319 ~ 61242006 (-) |
| tjp3 | LOC106613722 | coding | downstream | 132010 | 61104757 ~ 61131881 (-) |
| arhgap45b | LOC106613721 | coding | downstream | 167505 | 61082638 ~ 61096386 (-) |
| LOC110524239 | LOC106573579 | coding | downstream | 182027 | 61058949 ~ 61081864 (-) |
| pip5k1ca | LOC106613719 | coding | downstream | 210490 | 60973143 ~ 61053401 (-) |
| trnaa-agc-3 | NA | coding | upstream | 1357 | 61266697 ~ 61266769 (-) |
| LOC110522983 | LOC106613725 | coding | upstream | 38773 | 61304113 ~ 61511078 (-) |
| LOC110524247 | LOC106613727 | coding | upstream | 352647 | 61617987 ~ 61622355 (-) |
| LOC110524249 | LOC106613730 | coding | upstream | 394809 | 61660149 ~ 61679106 (-) |
| LOC110524252 | LOC106613733 | coding | upstream | 497778 | 61763118 ~ 61786542 (-) |
| G423497 | NA | non-coding | downstream | 15004 | 61248568 ~ 61248887 (-) |
| G423495 | NA | non-coding | downstream | 17100 | 61246558 ~ 61246791 (-) |
| G423435 | NA | non-coding | downstream | 170403 | 61031271 ~ 61093488 (-) |
| LOC110524237 | LOC106613718 | non-coding | downstream | 296127 | 60966400 ~ 60970979 (-) |
| G423394 | NA | non-coding | downstream | 326670 | 60937000 ~ 60937221 (-) |
| G423510 | NA | non-coding | upstream | 470 | 61265810 ~ 61266048 (-) |
| G423534 | hapln4 | non-coding | upstream | 18223 | 61283563 ~ 61285664 (-) |
| G423767 | NA | non-coding | upstream | 230655 | 61495995 ~ 61496241 (-) |
| G423794 | NA | non-coding | upstream | 263191 | 61528531 ~ 61528739 (-) |
| G424412 | NA | non-coding | upstream | 267490 | 61532830 ~ 61595934 (-) |
| G422347 | NA | other | downstream | 1162835 | 60100765 ~ 60101056 (-) |
| lsg1 | lsg1 | other | downstream | 2125634 | 59131152 ~ 59138429 (-) |
| G420982 | LOC106613655 | other | downstream | 2227592 | 59026103 ~ 59036299 (-) |
| G420421 | NA | other | downstream | 2849748 | 58413128 ~ 58414143 (-) |
| G424474 | NA | other | upstream | 351530 | 61616870 ~ 61617244 (-) |
| G424499 | LOC106613729 | other | upstream | 384627 | 61649967 ~ 61651775 (-) |
| G424502 | NA | other | upstream | 393693 | 61659033 ~ 61659585 (-) |
| G424649 | NA | other | upstream | 622858 | 61888198 ~ 61927422 (-) |
| G424678 | NA | other | upstream | 733186 | 61998526 ~ 62001309 (-) |
