G423541


Basic Information

Item Value
gene id G423541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 61289774 ~ 61290244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU479885
tccttacatactgaaaaaaaatataaagcaacacgtaaagtgttggtcccatgtttcatgagctgaaataaaagatcccagaaatgttccaaatgcacaaaaaatcttatttctctcaaatttggagCACACATTTTTTAcctccatgttagtgagcatttctcctttgccaagataatccacctgacaggtgtggcatatcaagaagctgattaaacagcatgatcattacacaggtgcacctcatgCTGGGGACAAAAtagaaggccactctaaaatgtgcagttttgtcacacaacacaatgccacagaggtctcaagttttgagggagtgtgcaattggcatgctggaatgtccaccagagctgttgccagagaattgaatgttaatttctctaccaatgtATATACTTTTTTGGCAGTACGTCACAACCGCAGACCGCATGTAACACGCCAGCCCAGCACCTCCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU479885 True 471 lncRNA 0.42 1 61289774 61290244

Neighbor

gene id symbol gene type direction distance location
hapln4 hapln4 coding upstream 4108 61267215 ~ 61285666 (+)
tm6sf2 tm6s1 coding upstream 24568 61248572 ~ 61265206 (+)
LOC118964633 polr2e coding upstream 208767 61077504 ~ 61081007 (+)
LOC110524234 LOC106613716 coding upstream 347392 60939330 ~ 60942382 (+)
LOC110524227 fbn3 coding upstream 428403 60770756 ~ 60861371 (+)
nr2c2ap nr2c2ap coding downstream 300359 61590603 ~ 61599332 (+)
LOC110524248 LOC106613729 coding downstream 346860 61637104 ~ 61655195 (+)
LOC110524251 LOC106613732 coding downstream 496203 61786447 ~ 61793643 (+)
gatad2ab NA coding downstream 518638 61808882 ~ 61840823 (+)
yjefn3 yjefn3 coding downstream 553772 61844016 ~ 62001312 (+)
G422978 NA non-coding upstream 98309 61161197 ~ 61191465 (+)
G422951 NA non-coding upstream 182832 61106216 ~ 61106942 (+)
G422886 NA non-coding upstream 274828 61013149 ~ 61014946 (+)
G422858 NA non-coding upstream 301514 60978012 ~ 60988260 (+)
G422861 NA non-coding upstream 317590 60971957 ~ 60972184 (+)
G423548 NA non-coding downstream 9396 61299640 ~ 61345067 (+)
G423600 NA non-coding downstream 115833 61406077 ~ 61472572 (+)
G423629 LOC106613725 non-coding downstream 152865 61443109 ~ 61443960 (+)
G423796 NA non-coding downstream 239657 61529901 ~ 61530115 (+)
G423850 NA non-coding downstream 306789 61597033 ~ 61597447 (+)
LOC110524226 LOC106573564 other upstream 593869 60694220 ~ 60695905 (+)
G420634 NA other upstream 2345557 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 2872998 58411240 ~ 58418268 (+)
G419452 NA other upstream 3390126 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 3922437 57352343 ~ 57367627 (+)
G423922 NA other downstream 431293 61721537 ~ 61722024 (+)
G424079 NA other downstream 815279 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 992908 62283054 ~ 62327772 (+)
G425224 NA other downstream 1754846 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 2386170 63676409 ~ 63684848 (+)

Expression


Co-expression Network