G424467


Basic Information

Item Value
gene id G424467
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 61603707 ~ 61607463 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480887
catatggtgtgcattataaaaagAGAGGTGGGAAGATGTATAGAAGACAGAAAAGGAAAGCGGTAAAACAGGAGCAGGgaagacagcatatgattaatgacttacagtgctaccctaatattctctcagttcatcacaattacatcgTGTCTCTAgcagtgtctcctaaccagccttgggctccCAGTCGGCTggaaggttatcttaagagcgggtgagatggcgatgacgggactggcttcctctctcacatcaaaacatacatgCAGACGATAGACAGAAGGATTGAGAGCATGATTaagctttgtttttttttattctaacacagtcagtcatcataatcaacaggaggtgaaatgcaaaactgaccttggatcattaactctggtaTTACTACATCTACCTGTATGTCAATGTAAAGCAtatttaataatacttcctgttgacccgaccaagtgacctctcaactatgatcatgctgtgccctctgtgtcagccagttcagatgcgaGAGGGTTTCAtcgacacagctgatataacctataGGATTCAGGGAGAAGggggatgaagtgaaggagaccAACTGTTATTGCGAAAATAAGGTAGTTAAAGAGACTAttcaacaggaatctgtgtgtcgtctcacctggtgtccacactaagtggctactGAGTACTcatgctgaaaaacagacacatgaggacaaacaGTAGAAGATAATGTCATTAGACTTTTACATTACCAgatcacaaattaatacataaataccacttgaagcttgatgacGACCTGATCATTGGAcctgatcatcatcatcagttGTGTAGTGCTAAGGCAACAACTGGTGAGGTGTCAGGTTCGCCTCTGTCCTTAAAAGGGTGATAATTCCAACTCTGAAATGCTGCAGAGCTGCTCGCAGACGAGGTAGGAACACATATCCCACAAGGAAGAGGTGGAAAGAATTTGACAGGTCAAGGTAGCGTTCTTCCTCCAAACTGCAGCAATTTGTAGTACTGACATGTCACAGCACTCCAAACATCTCTCCATAAGCGTTCCACtctaacagagagaaagaaaaggcttTTGTGTGGTGGGGGGGACCTAAtccctgtggtcctgtggtcctccGCCATGAATTAACCTGTTTCAATATTTACGTATTACCAGCTATTGAAAAACAATTCTAATTCCATACATCATTGAAAATTTGTAAGAATAAAAAAGTTAAAATAACATATTTGATGGAGACATACATCTTAGTACCTTATCAATTTATGATTTGTATCAATGTGAACAAGAAAAGCCCACATGGGTCATCCATGCCTTAATGGCCCTGACTTTCTTGTCTACGGTAACTCTTCATATGACATATCAGAATAGCATTCCCTGAGACATATTCTGTTCTTTCATCCTTCTGTTAAAAAAAAGCTTACCGTTACACGTGAAATATGATTATATATCGACTATGAAACAAAATAGGACATGGCCTGCATATGAGTTGCCATGAAAGAAAGTTCAATTAATTCAACTGAAAATGTTCGAGAACAGGCATTTGTAGATAAATGTTTTTGGTTAGCTTAAGAATAATAATTGCATGATTTATCATTCTACggtgtgtatgtacagttgaagtcggaagtttacatacaccttagtgaaatacatttaaactcagtttttcacaattcctcacatttaatcctagtagaaatgtcctgtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataatattagagagaatgatttatttcagcttgtatttccttcatcacatttccagtgggttagaagtttacatacacctaattaatatttgatagcattgcctttaatgtgtttaacttgggtcaaacgtttcaggtagccttccacaagcttcccacaataagttgggtgaattttggcccattcctcctgacagagctggtgtaactgagtcaggtttgtaggcctccttgctcgcacacgctttttaagtTCTGTCCACAactgttctataggattgaggtcagggctttgtgatggccactccaataccttgactttgttgtccttaagccattttgccacaactttggaagtatgcttggggtcattgtcaatttggaagacccatttgaggcCAAGCTAAAACTTCCTGAccgatgttttgagatgttgcttcaatatatctacataactttccttcttcatgatgccatctattttgtgaagtgcaccagtccctcctgcggcaaagcacccccacaacatgatgctgccacccccgtgcctcatggttgggatggtgttcttcggcttgcaagcttccccctttttactccaaacataacgatggtcattatggccaaacagttctatttttgtttcatcagaccagaggacatttctccaaaaagtaccatctttgtccacatgtgcagttgcaaaccgtagtctggcattttgatggcggttttggagaagtggcttcttccatgttgagcggcctttcatgttatgtcgatataggactcgttttagtgtggatatagatacttttgtacctgtttcctccagcatcttcacaagggcctttgctgttgttctgggattgatttgcaaagtacgttcatctctaggagacagaacgcatctccttcctgagcggtatgacggctgcgtggttccatggtgtttatacttgcatactattgtttgtacatatgaacgtggtaccttcaggcatttggaaattgttcccaaggatgaaccagacttgtggaggtctacaatttgtggaggtgtggaggtctaggctgatttatttttattttcccatgatgtcaaacaaagaggcactgagtttgaaggtaggccttgaaatacatccacaggtacacctcaaattgactcaaatgatgtcaattagcctatcagaagctcctaAAGCCATTAAGTAATTTTCTgtaaatttccaagctgtttaaaggcactgtcaacttagtgtatgtaaacttctgacccactggaattgtgatacagtgaattaattataagtgaaataatctgtctgaaaacaattgtcggaaaaatgacttgtgtcatgcagaaagtagatgtcctaaccgacttgccaaaactatagtttgtcaacaagacatttgtggagtggttgaaaaacgatttttttaatgactccaacctgtagggctgtgtatgtaaatttccgacttcaactgtatgtaatgaaCCAACACTGAATATGTAGGAGCTAACTTTCGTAGGTGTCCGCTAAGACTTCCTTTGTGTTAGAAAGAAAGTATTGGTTGTACCCAAATTGACAATTCCAAAAATTGCCAAAATGGAGTGTGGTTGATAGCAATATCCCGCCAGCATGCCCACAAGCGAGCCACTCAGGCAGAGAATTACGCATGGAAGAGGGTGAGGAATGAGATGGGAGTAACAATTTGTTGCAAGTTGAGGAGTGGGGCTAATAGCTgaatagactattcaacctttactaaagaatagtcTAATAGCCAAGCTAGGTGTGGAAAAAAAACtcctatcacagaccagatttgccctaacgaccaagggggagttagagcactgattatgcttttgggtcccaatGTACTACTGTGtctctgacaatgaatgggcaatATAAACCAAATATATTGGTCATACTTAATACTATATGGTCATACTTATAATTGTACACGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480887 True 3757 lncRNA 0.40 1 61603707 61607463

Neighbor

gene id symbol gene type direction distance location
LOC110522983 LOC106613725 coding downstream 92629 61304113 ~ 61511078 (-)
trnaa-agc-3 NA coding downstream 336938 61266697 ~ 61266769 (-)
LOC110524243 LOC106613723 coding downstream 361701 61139319 ~ 61242006 (-)
tjp3 LOC106613722 coding downstream 471826 61104757 ~ 61131881 (-)
arhgap45b LOC106613721 coding downstream 507321 61082638 ~ 61096386 (-)
LOC110524247 LOC106613727 coding upstream 10524 61617987 ~ 61622355 (-)
LOC110524249 LOC106613730 coding upstream 52686 61660149 ~ 61679106 (-)
LOC110524252 LOC106613733 coding upstream 155655 61763118 ~ 61786542 (-)
tssk6 LOC106613736 coding upstream 234098 61841561 ~ 61842727 (-)
si:ch211-212d10.2 LOC106613739 coding upstream 426626 62033465 ~ 62037994 (-)
G424464 NA non-coding downstream 1433 61601882 ~ 61602274 (-)
G424463 NA non-coding downstream 2014 61601272 ~ 61601693 (-)
G424462 NA non-coding downstream 2595 61600754 ~ 61601112 (-)
G424412 NA non-coding downstream 7773 61532830 ~ 61595934 (-)
G423794 NA non-coding downstream 74968 61528531 ~ 61528739 (-)
G424471 NA non-coding upstream 3835 61611298 ~ 61611570 (-)
G424483 NA non-coding upstream 20813 61628276 ~ 61628498 (-)
G424487 NA non-coding upstream 29650 61637113 ~ 61637366 (-)
G424497 NA non-coding upstream 41985 61649448 ~ 61649651 (-)
LOC110524239 LOC106573579 other downstream 532564 61058949 ~ 61081864 (-)
G422347 NA other downstream 1502651 60100765 ~ 60101056 (-)
lsg1 lsg1 other downstream 2465450 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 2567408 59026103 ~ 59036299 (-)
G420421 NA other downstream 3189564 58413128 ~ 58414143 (-)
G424474 NA other upstream 9407 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 42504 61649967 ~ 61651775 (-)
G424502 NA other upstream 51570 61659033 ~ 61659585 (-)
G424649 NA other upstream 280735 61888198 ~ 61927422 (-)
G424678 NA other upstream 391063 61998526 ~ 62001309 (-)

Expression


Co-expression Network