G423881


Basic Information

Item Value
gene id G423881
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 61644672 ~ 61644981 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480238
gtgctcagccccctcctgttctccctgttcactcatgactgcatggccaggcacgactccaacaccatcattaaatttgccgatgatacaacagtggtaggcctgatcaccgacaacaatgaggcagcctatagggaggaggtcagagacctggttgtgtggtgccaggacaacaacctctccctcaacgtgatcaagacaaaggagatgattgtggactacaggaaatagaggaccaagcacgcccccattctcatcgacagggctgcagtggagcatgttgagagcttcaagttccttggtgttcaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480238 True 310 lncRNA 0.52 1 61644672 61644981

Neighbor

gene id symbol gene type direction distance location
nr2c2ap nr2c2ap coding upstream 45340 61590603 ~ 61599332 (+)
hapln4 hapln4 coding upstream 359006 61267215 ~ 61285666 (+)
tm6sf2 tm6s1 coding upstream 379466 61248572 ~ 61265206 (+)
LOC118964633 polr2e coding upstream 563665 61077504 ~ 61081007 (+)
LOC110524234 LOC106613716 coding upstream 702290 60939330 ~ 60942382 (+)
LOC110524251 LOC106613732 coding downstream 141466 61786447 ~ 61793643 (+)
gatad2ab NA coding downstream 163901 61808882 ~ 61840823 (+)
yjefn3 yjefn3 coding downstream 199035 61844016 ~ 62001312 (+)
cilp2 cilp2 coding downstream 361321 62006302 ~ 62030169 (+)
si:ch211-212d10.1 LOC106614002 coding downstream 423217 62068198 ~ 62072769 (+)
G423875 NA non-coding upstream 6130 61638322 ~ 61638542 (+)
G423871 NA non-coding upstream 10041 61634344 ~ 61634631 (+)
G423859 NA non-coding upstream 23295 61620898 ~ 61621377 (+)
G423858 NA non-coding upstream 24537 61619835 ~ 61620135 (+)
G423857 LOC106613727 non-coding upstream 25608 61618490 ~ 61619064 (+)
G423874 NA non-coding downstream 11005 61655986 ~ 61656390 (+)
G423901 NA non-coding downstream 34640 61679621 ~ 61679853 (+)
G423906 NA non-coding downstream 40431 61685412 ~ 61685626 (+)
G423907 NA non-coding downstream 45727 61690708 ~ 61772270 (+)
G423926 NA non-coding downstream 87890 61732871 ~ 61733382 (+)
LOC110524226 LOC106573564 other upstream 948767 60694220 ~ 60695905 (+)
G420634 NA other upstream 2700455 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 3227896 58411240 ~ 58418268 (+)
G419452 NA other upstream 3745024 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 4277335 57352343 ~ 57367627 (+)
G423922 NA other downstream 76556 61721537 ~ 61722024 (+)
G424079 NA other downstream 460542 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 638171 62283054 ~ 62327772 (+)
G425224 NA other downstream 1400109 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 2031433 63676409 ~ 63684848 (+)

Expression


Co-expression Network