Gene
RNA
| Item | Value |
|---|---|
| gene id | G424500 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 61652022 ~ 61652284 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480921 | True | 263 | lncRNA | 0.37 | 1 | 61652022 | 61652284 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524247 | LOC106613727 | coding | downstream | 29667 | 61617987 ~ 61622355 (-) |
| LOC110522983 | LOC106613725 | coding | downstream | 140944 | 61304113 ~ 61511078 (-) |
| trnaa-agc-3 | NA | coding | downstream | 385253 | 61266697 ~ 61266769 (-) |
| LOC110524243 | LOC106613723 | coding | downstream | 410016 | 61139319 ~ 61242006 (-) |
| tjp3 | LOC106613722 | coding | downstream | 520141 | 61104757 ~ 61131881 (-) |
| LOC110524249 | LOC106613730 | coding | upstream | 7865 | 61660149 ~ 61679106 (-) |
| LOC110524252 | LOC106613733 | coding | upstream | 110834 | 61763118 ~ 61786542 (-) |
| tssk6 | LOC106613736 | coding | upstream | 189277 | 61841561 ~ 61842727 (-) |
| si:ch211-212d10.2 | LOC106613739 | coding | upstream | 381805 | 62033465 ~ 62037994 (-) |
| LOC110524260 | LOC105011525 | coding | upstream | 424285 | 62076569 ~ 62083302 (-) |
| G424497 | NA | non-coding | downstream | 2371 | 61649448 ~ 61649651 (-) |
| G424487 | NA | non-coding | downstream | 14656 | 61637113 ~ 61637366 (-) |
| G424483 | NA | non-coding | downstream | 23524 | 61628276 ~ 61628498 (-) |
| G424471 | NA | non-coding | downstream | 40452 | 61611298 ~ 61611570 (-) |
| G424501 | LOC106613729 | non-coding | upstream | 648 | 61652932 ~ 61656404 (-) |
| G424512 | NA | non-coding | upstream | 28367 | 61680651 ~ 61680884 (-) |
| G424514 | NA | non-coding | upstream | 31619 | 61683903 ~ 61684158 (-) |
| G424515 | NA | non-coding | upstream | 32127 | 61684411 ~ 61684639 (-) |
| G424535 | NA | non-coding | upstream | 59156 | 61711440 ~ 61711921 (-) |
| G424499 | LOC106613729 | other | downstream | 247 | 61649967 ~ 61651775 (-) |
| G424474 | NA | other | downstream | 34778 | 61616870 ~ 61617244 (-) |
| LOC110524239 | LOC106573579 | other | downstream | 580879 | 61058949 ~ 61081864 (-) |
| G422347 | NA | other | downstream | 1550966 | 60100765 ~ 60101056 (-) |
| lsg1 | lsg1 | other | downstream | 2513765 | 59131152 ~ 59138429 (-) |
| G424502 | NA | other | upstream | 6749 | 61659033 ~ 61659585 (-) |
| G424649 | NA | other | upstream | 235914 | 61888198 ~ 61927422 (-) |
| G424678 | NA | other | upstream | 346242 | 61998526 ~ 62001309 (-) |
| LOC110524277 | LOC106613757 | other | upstream | 1151654 | 62803832 ~ 62808176 (-) |
| G425612 | NA | other | upstream | 1197720 | 62850004 ~ 62850247 (-) |
