G424535



Basic Information


Item Value
gene id G424535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 61711440 ~ 61711921 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU480973
attgttgttattgtttctaaGAGACATTTTCTGACACAGTGTGAAATGTTCCCACATGAATGAATATAAACTgttcacccccctccccctcaaaaaataaaataaaactcatTATGCATGCTAAGATAGCATTGTGGTTACTATTAGGACTCTCACCTGTTCTCCTTGTCCAGGCCCACACAGCTACTGATCTCTCTCACTCAAATTATTTCTCTGCGTTTTTTTGTTTTTCTGGCTTGAGATGATGATATATCTGTCCAAGGTCCTGCATCCTGCAAACACAGAAAATTCAGTTGAGATGGTGATGCATGTAGTCAAATTTCTGCAGTAGTTGTTTTTGTATGACACCGCAGGCATATTTTCAGGTCTTGAGGTGTCTGAATAAGGGGAATATTGTTTAGCAGTACTGGAGAGAGACCTTAGGGATTACACACATATAATAGAATGCCtctgatgccaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU480973 True 461 lncRNA 0.39 2 61711440 61711921

Neighbor


gene id symbol gene type direction distance location
LOC110524249 LOC106613730 coding downstream 32334 61660149 ~ 61679106 (-)
LOC110524247 LOC106613727 coding downstream 89085 61617987 ~ 61622355 (-)
LOC110522983 LOC106613725 coding downstream 200362 61304113 ~ 61511078 (-)
trnaa-agc-3 NA coding downstream 444671 61266697 ~ 61266769 (-)
LOC110524243 LOC106613723 coding downstream 469434 61139319 ~ 61242006 (-)
LOC110524252 LOC106613733 coding upstream 51197 61763118 ~ 61786542 (-)
tssk6 LOC106613736 coding upstream 129640 61841561 ~ 61842727 (-)
si:ch211-212d10.2 LOC106613739 coding upstream 322168 62033465 ~ 62037994 (-)
LOC110524260 LOC105011525 coding upstream 364648 62076569 ~ 62083302 (-)
cirbpb LOC106613741 coding upstream 372532 62084453 ~ 62092024 (-)
G424515 NA non-coding downstream 26801 61684411 ~ 61684639 (-)
G424514 NA non-coding downstream 27282 61683903 ~ 61684158 (-)
G424512 NA non-coding downstream 30556 61680651 ~ 61680884 (-)
G424501 LOC106613729 non-coding downstream 55036 61652932 ~ 61656404 (-)
G424500 NA non-coding downstream 59156 61652022 ~ 61652284 (-)
G424586 NA non-coding upstream 125828 61837749 ~ 61844260 (-)
G424620 NA non-coding upstream 141879 61853800 ~ 61878515 (-)
G424649 NA non-coding upstream 176277 61888198 ~ 61927422 (-)
G424654 NA non-coding upstream 183087 61895008 ~ 61914769 (-)
G424650 NA non-coding upstream 184555 61896476 ~ 61933735 (-)
G424502 NA other downstream 51855 61659033 ~ 61659585 (-)
G424499 LOC106613729 other downstream 59665 61649967 ~ 61651775 (-)
G424474 NA other downstream 94196 61616870 ~ 61617244 (-)
LOC110524239 LOC106573579 other downstream 640297 61058949 ~ 61081864 (-)
G422347 NA other downstream 1610384 60100765 ~ 60101056 (-)
G424678 NA other upstream 286605 61998526 ~ 62001309 (-)
LOC110524277 LOC106613757 other upstream 1092017 62803832 ~ 62808176 (-)
G425612 NA other upstream 1138083 62850004 ~ 62850247 (-)
G425647 NA other upstream 1182738 62894659 ~ 62900503 (-)

Expression



Co-expression Network