G424031


Basic Information

Item Value
gene id G424031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 61983391 ~ 62021914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480404
tatggtcagatgacatgaaaatagagctctttggccacacacaccaATGGTGGCTTTGGTGTCGAAAAACAGAAGCCTATGCAGAAAAGTATCTCATACCTacggtaaaatatggtggtgcatctttgatgttatggggctattttgcttccactggtacTATGACCCTTGTTAAAGGTCagcatcatgaactttaccaagtaccaggacatttgagccaaaaacctggttgcctctgccaggaggctgaaaattgTCCGCAAGTGAATCTTTTAGCAAGACGATACCAAAAGTACACATCAAAAGCCAGAAAG

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU480404 True 314 lncRNA 0.43 2 61983391 62021914

Neighbor

gene id symbol gene type direction distance location
gatad2ab NA coding upstream 142568 61808882 ~ 61840823 (+)
LOC110524251 LOC106613732 coding upstream 189748 61786447 ~ 61793643 (+)
LOC110524248 LOC106613729 coding upstream 328196 61637104 ~ 61655195 (+)
nr2c2ap nr2c2ap coding upstream 384059 61590603 ~ 61599332 (+)
hapln4 hapln4 coding upstream 697725 61267215 ~ 61285666 (+)
si:ch211-212d10.1 LOC106614002 coding downstream 46284 62068198 ~ 62072769 (+)
LOC110524265 LOC106613745 coding downstream 261140 62283054 ~ 62327772 (+)
LOC100301654 LOC106613747 coding downstream 422761 62444675 ~ 62449760 (+)
LOC110524267 LOC106613748 coding downstream 446349 62468263 ~ 62474145 (+)
bsg bsg coding downstream 454960 62476874 ~ 62490792 (+)
G424016 NA non-coding upstream 23117 61886553 ~ 61960274 (+)
G424018 NA non-coding upstream 28965 61887299 ~ 61954426 (+)
G424025 NA non-coding upstream 39162 61938553 ~ 61944229 (+)
G424019 NA non-coding upstream 47004 61895428 ~ 61936387 (+)
G424017 NA non-coding upstream 53636 61886970 ~ 61929755 (+)
G424061 NA non-coding downstream 25111 62047025 ~ 62047292 (+)
G424041 NA non-coding downstream 64908 62086822 ~ 62090999 (+)
G424077 NA non-coding downstream 80282 62102196 ~ 62102397 (+)
G424080 NA non-coding downstream 85690 62107604 ~ 62107883 (+)
G424081 NA non-coding downstream 86645 62108559 ~ 62108771 (+)
G423922 NA other upstream 261367 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 1287486 60694220 ~ 60695905 (+)
G420634 NA other upstream 3039174 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 3566615 58411240 ~ 58418268 (+)
G419452 NA other upstream 4083743 57884380 ~ 57899648 (+)
G424079 NA other downstream 83609 62105523 ~ 62105872 (+)
G425224 NA other downstream 1023176 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 1654500 63676409 ~ 63684848 (+)
sac3d1 sac3d1 other downstream 2155114 64177028 ~ 64183138 (+)

Expression


Co-expression Network