G424178


Basic Information

Item Value
gene id G424178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62246638 ~ 62246914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480565
ATCTTTCAATTAACAGCCTACTATTTGACTTCCCTAAAAAGCATAGTTTGGTCCATTCATGTTCACTATTGGAGAACCATGAGCATGCAATGCCCTACTCATCATCGGTTGGAGACAGGTttatgtgtgttctctgatgacaGTTACTGGAAAGACTTTCCAACACATTGAAATGGTATGTAACCATAGGGTGATCATTTgcatttgaaatgtttggacataACATGGCATTTGTTTCTGCACAATGCATTTTTTGTACAACTAACGCGTTCAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480565 True 277 lncRNA 0.38 1 62246638 62246914

Neighbor

gene id symbol gene type direction distance location
si:ch211-212d10.1 LOC106614002 coding upstream 173869 62068198 ~ 62072769 (+)
cilp2 cilp2 coding upstream 216469 62006302 ~ 62030169 (+)
yjefn3 yjefn3 coding upstream 245326 61844016 ~ 62001312 (+)
gatad2ab NA coding upstream 405815 61808882 ~ 61840823 (+)
LOC110524251 LOC106613732 coding upstream 452995 61786447 ~ 61793643 (+)
LOC110524265 LOC106613745 coding downstream 36140 62283054 ~ 62327772 (+)
LOC100301654 LOC106613747 coding downstream 197761 62444675 ~ 62449760 (+)
LOC110524267 LOC106613748 coding downstream 221349 62468263 ~ 62474145 (+)
bsg bsg coding downstream 229960 62476874 ~ 62490792 (+)
LOC110524269 bsg coding downstream 232871 62479785 ~ 62485347 (+)
G424176 NA non-coding upstream 949 62245489 ~ 62245689 (+)
G424175 NA non-coding upstream 1277 62244792 ~ 62245361 (+)
G424174 NA non-coding upstream 1978 62244445 ~ 62244660 (+)
G424173 NA non-coding upstream 2669 62243755 ~ 62243969 (+)
G424172 NA non-coding upstream 3034 62243402 ~ 62243604 (+)
G424177 NA non-coding downstream 1316 62248230 ~ 62249000 (+)
G424180 NA non-coding downstream 4376 62251290 ~ 62251826 (+)
G424181 NA non-coding downstream 6920 62253834 ~ 62254193 (+)
G424182 NA non-coding downstream 7489 62254403 ~ 62254621 (+)
G424184 NA non-coding downstream 12357 62259271 ~ 62259484 (+)
G424079 NA other upstream 140766 62105523 ~ 62105872 (+)
G423922 NA other upstream 524614 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 1550733 60694220 ~ 60695905 (+)
G420634 NA other upstream 3302421 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 3829862 58411240 ~ 58418268 (+)
G425224 NA other downstream 798176 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 1429500 63676409 ~ 63684848 (+)
sac3d1 sac3d1 other downstream 1930114 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 1996688 64243153 ~ 64244790 (+)

Expression


Co-expression Network