G424804



Basic Information


Item Value
gene id G424804
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62252071 ~ 62252271 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU481260
GTAATAACTGTGTCAAAATCCAATTCCTGGTATAGGATTGCCATTGTTTGATGATTGCCAGGTATATTATCACCTGCAGAACTGGTCATTTGCTGAAAtaacttttgtttatttgtaTTCAGGTGAGTTTGTAACCATGCACTGTGTTTTCCTACACTGGTTGCCAAGAGATTTTTTCTTCTTTGAATGTTTTCTTTCTTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU481260 True 201 lncRNA 0.35 1 62252071 62252271

Neighbor


gene id symbol gene type direction distance location
midn LOC106613743 coding downstream 325 62217498 ~ 62251746 (-)
cirbpb LOC106613741 coding downstream 160047 62084453 ~ 62092024 (-)
LOC110524260 LOC105011525 coding downstream 168769 62076569 ~ 62083302 (-)
si:ch211-212d10.2 LOC106613739 coding downstream 214077 62033465 ~ 62037994 (-)
tssk6 LOC106613736 coding downstream 409344 61841561 ~ 61842727 (-)
atp5f1d LOC106613744 coding upstream 25018 62277289 ~ 62281739 (-)
LOC110524266 LOC106613746 coding upstream 76568 62328839 ~ 62441794 (-)
LOC110524270 LOC106613752 coding upstream 333967 62586238 ~ 62680215 (-)
LOC118964634 NA coding upstream 544346 62796617 ~ 62797240 (-)
LOC110524277 LOC106613757 coding upstream 551561 62803832 ~ 62808176 (-)
G424735 NA non-coding downstream 153949 62097904 ~ 62098122 (-)
G424721 NA non-coding downstream 198005 62052911 ~ 62054066 (-)
G424719 NA non-coding downstream 204780 62046836 ~ 62047291 (-)
G424806 NA non-coding upstream 2131 62254402 ~ 62255328 (-)
G424807 NA non-coding upstream 3248 62255519 ~ 62255787 (-)
G424808 NA non-coding upstream 6385 62258656 ~ 62258906 (-)
G424809 NA non-coding upstream 8712 62260983 ~ 62261300 (-)
G424823 NA non-coding upstream 29901 62282172 ~ 62282376 (-)
G424678 NA other downstream 250762 61998526 ~ 62001309 (-)
G424649 NA other downstream 324649 61888198 ~ 61927422 (-)
G424502 NA other downstream 592486 61659033 ~ 61659585 (-)
G424499 LOC106613729 other downstream 600296 61649967 ~ 61651775 (-)
G424474 NA other downstream 634827 61616870 ~ 61617244 (-)
G425612 NA other upstream 597733 62850004 ~ 62850247 (-)
G425647 NA other upstream 642388 62894659 ~ 62900503 (-)
LOC110524282 LOC106584262 other upstream 1007377 63257597 ~ 63260481 (-)
G425810 LOC106613766 other upstream 1048653 63300924 ~ 63303394 (-)

Expression



Co-expression Network