G424806


Basic Information

Item Value
gene id G424806
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62254402 ~ 62255328 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU481262
tttaaataatgcaaaaacaaagtgttggagaagaaagtaaaagtgcaatatgtgccatgtaaaaaagctaacgtttaagttccttgctcagaacatgagaacatatgaaagttggtggttccttttaacaggagtcttcaatattcccaggtaagaagttttaggttgtagttattataggaattttaggacaatttctctctatacgatttgtttTTCATATACCtttactattggatgttcttataggcactttagtattgccagtgtaacagtatagcttccgtccctctcctcgcccctacctgggctcgaaccaggaacacatcgacaacagccaccctcgaagcagcgttacccatcgctccacaaaagccgcggcccttgcaaagcaaggggaacaaccactccaagtctcagagcgagtgacgtttgaaatgctattagcgcgcaccccgctaactagctagccatttcacatccgttacaccagcctaatctcgggagttgataggcttgaagtcataaacagctcagtgcttgaagcacagcgacgagctgctggcaaaacgcacgaaagtgctgtttgaatgaatgcttacgagcctgctggtgcctaccatcgctcagtcagactgctctatcaaatcatagacttagttatagcATATTAACACAcataaatacgagccttaggtcattaatatggtcgaaggggcggcagggtagcctagtggttagagcgttggactagtaaccggaaggttgtgagttcaaacccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcccaggccgtcattgaaaataagaatttgttcttaactgacttgcctggttaaataaaggtaaaataaaaaataaaaaaataaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481262 True 927 lncRNA 0.43 1 62254402 62255328

Neighbor

gene id symbol gene type direction distance location
midn LOC106613743 coding downstream 2656 62217498 ~ 62251746 (-)
cirbpb LOC106613741 coding downstream 162378 62084453 ~ 62092024 (-)
LOC110524260 LOC105011525 coding downstream 171100 62076569 ~ 62083302 (-)
si:ch211-212d10.2 LOC106613739 coding downstream 216408 62033465 ~ 62037994 (-)
tssk6 LOC106613736 coding downstream 411675 61841561 ~ 61842727 (-)
atp5f1d LOC106613744 coding upstream 21961 62277289 ~ 62281739 (-)
LOC110524266 LOC106613746 coding upstream 73511 62328839 ~ 62441794 (-)
LOC110524270 LOC106613752 coding upstream 330910 62586238 ~ 62680215 (-)
LOC118964634 NA coding upstream 541289 62796617 ~ 62797240 (-)
LOC110524277 LOC106613757 coding upstream 548504 62803832 ~ 62808176 (-)
G424804 NA non-coding downstream 2131 62252071 ~ 62252271 (-)
G424735 NA non-coding downstream 156280 62097904 ~ 62098122 (-)
G424721 NA non-coding downstream 200336 62052911 ~ 62054066 (-)
G424719 NA non-coding downstream 207111 62046836 ~ 62047291 (-)
G424807 NA non-coding upstream 191 62255519 ~ 62255787 (-)
G424808 NA non-coding upstream 3328 62258656 ~ 62258906 (-)
G424809 NA non-coding upstream 5655 62260983 ~ 62261300 (-)
G424823 NA non-coding upstream 26844 62282172 ~ 62282376 (-)
G424830 NA non-coding upstream 35009 62290337 ~ 62431657 (-)
G424678 NA other downstream 253093 61998526 ~ 62001309 (-)
G424649 NA other downstream 326980 61888198 ~ 61927422 (-)
G424502 NA other downstream 594817 61659033 ~ 61659585 (-)
G424499 LOC106613729 other downstream 602627 61649967 ~ 61651775 (-)
G424474 NA other downstream 637158 61616870 ~ 61617244 (-)
G425612 NA other upstream 594676 62850004 ~ 62850247 (-)
G425647 NA other upstream 639331 62894659 ~ 62900503 (-)
LOC110524282 LOC106584262 other upstream 1004320 63257597 ~ 63260481 (-)
G425810 LOC106613766 other upstream 1045596 63300924 ~ 63303394 (-)

Expression

G424806 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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G424806 Expression in each Bioproject

Bar chart with 21 bars.
G424806 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network