G424878



Basic Information


Item Value
gene id G424878
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62476932 ~ 62485576 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU481350
CCATCTGGTGGCTCAAACATGCAAACACACGCTGCCTGCCTGGCAGGCACTTACATGTACTCGGTGTAGAGAGCAGCAGAGTCCTGCTTGGATGACTCGATCACATTGCCATTCCTCATCCAGTAATGACCTTTGACTGTGGACGGGGGGTTGGTCAGGTTGCACGAGAGAATGGCAGAGGTCTGGTTGTTCACCTCCATAGGTGAAGACACAATTAAGGGATGTCAGGGCATCGGCTCGGTACAAGCACAAGAGGAGGGCACTTAAACCCCACAGATATTTCATTTCGACGATGTCCTTTTCTACCACAGATATATACtttcacaatttttttttaatacgTTAGCTCTGCTCCACCATCGACCGAGTTGGTCGTCCTCTACTTGTTCCTCAATTCAATCAGTCACGTCGTGAACTAGCACGTACACATGACATGACGCTCGGGCGTGACCAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU481350 True 454 lncRNA 0.49 2 62476932 62485576

Neighbor


gene id symbol gene type direction distance location
LOC110524266 LOC106613746 coding downstream 35138 62328839 ~ 62441794 (-)
atp5f1d LOC106613744 coding downstream 195193 62277289 ~ 62281739 (-)
midn LOC106613743 coding downstream 225186 62217498 ~ 62251746 (-)
cirbpb LOC106613741 coding downstream 384908 62084453 ~ 62092024 (-)
LOC110524260 LOC105011525 coding downstream 393630 62076569 ~ 62083302 (-)
LOC110524270 LOC106613752 coding upstream 100662 62586238 ~ 62680215 (-)
LOC118964634 NA coding upstream 311041 62796617 ~ 62797240 (-)
LOC110524277 LOC106613757 coding upstream 318256 62803832 ~ 62808176 (-)
LOC110524279 LOC106613762 coding upstream 434002 62919578 ~ 63214903 (-)
LOC110524282 LOC106584262 coding upstream 772021 63257597 ~ 63260481 (-)
G424830 NA non-coding downstream 45275 62290337 ~ 62431657 (-)
G424868 NA non-coding downstream 128734 62347724 ~ 62348198 (-)
G424823 NA non-coding downstream 194556 62282172 ~ 62282376 (-)
G424809 NA non-coding downstream 215632 62260983 ~ 62261300 (-)
G424808 NA non-coding downstream 218026 62258656 ~ 62258906 (-)
G424903 NA non-coding upstream 8913 62494489 ~ 62494789 (-)
G424927 NA non-coding upstream 43740 62529316 ~ 62606813 (-)
G425568 NA non-coding upstream 310160 62795736 ~ 62796548 (-)
G425587 NA non-coding upstream 322983 62808559 ~ 62809332 (-)
G425588 NA non-coding upstream 325117 62810693 ~ 62810905 (-)
G424678 NA other downstream 475623 61998526 ~ 62001309 (-)
G424649 NA other downstream 549510 61888198 ~ 61927422 (-)
G424502 NA other downstream 817347 61659033 ~ 61659585 (-)
G424499 LOC106613729 other downstream 825157 61649967 ~ 61651775 (-)
G424474 NA other downstream 859688 61616870 ~ 61617244 (-)
G425612 NA other upstream 364428 62850004 ~ 62850247 (-)
G425647 NA other upstream 409083 62894659 ~ 62900503 (-)
G425810 LOC106613766 other upstream 815348 63300924 ~ 63303394 (-)

Expression



Co-expression Network