Gene
RNA
| Item | Value |
|---|---|
| gene id | G425085 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 62786959 ~ 62788098 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU481568 | True | 1140 | lncRNA | 0.40 | 1 | 62786959 | 62788098 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524272 | LOC106613754 | coding | upstream | 1382 | 62725130 ~ 62785594 (+) |
| LOC110524271 | LOC106613753 | coding | upstream | 40033 | 62689887 ~ 62746926 (+) |
| hcn2 | LOC106613751 | coding | upstream | 226408 | 62493156 ~ 62560551 (+) |
| bsg | bsg | coding | upstream | 296167 | 62476874 ~ 62490792 (+) |
| LOC110524269 | bsg | coding | upstream | 301612 | 62479785 ~ 62485347 (+) |
| LOC110524274 | LOC106613755 | coding | downstream | 3881 | 62791979 ~ 62796480 (+) |
| LOC110524275 | LOC105011538 | coding | downstream | 9606 | 62797704 ~ 62802340 (+) |
| LOC110524276 | LOC106613760 | coding | downstream | 20823 | 62808921 ~ 62821203 (+) |
| LOC110524278 | LOC106613761 | coding | downstream | 97303 | 62885401 ~ 62892180 (+) |
| LOC110524284 | LOC106613766 | coding | downstream | 508985 | 63297083 ~ 63303403 (+) |
| G425058 | NA | non-coding | upstream | 14690 | 62733477 ~ 62772269 (+) |
| G424285 | NA | non-coding | upstream | 180322 | 62529327 ~ 62606637 (+) |
| G424288 | NA | non-coding | upstream | 182873 | 62533513 ~ 62604086 (+) |
| G424193 | NA | non-coding | upstream | 353935 | 62416223 ~ 62433024 (+) |
| G425086 | NA | non-coding | downstream | 115 | 62788213 ~ 62788412 (+) |
| G425090 | NA | non-coding | downstream | 930 | 62789028 ~ 62789271 (+) |
| G425091 | NA | non-coding | downstream | 2238 | 62790336 ~ 62790704 (+) |
| G425097 | NA | non-coding | downstream | 24640 | 62812738 ~ 62812939 (+) |
| G425119 | NA | non-coding | downstream | 65929 | 62854027 ~ 62854240 (+) |
| LOC110524265 | LOC106613745 | other | upstream | 480022 | 62283054 ~ 62327772 (+) |
| G424079 | NA | other | upstream | 681087 | 62105523 ~ 62105872 (+) |
| G423922 | NA | other | upstream | 1064935 | 61721537 ~ 61722024 (+) |
| LOC110524226 | LOC106573564 | other | upstream | 2091054 | 60694220 ~ 60695905 (+) |
| G420634 | NA | other | upstream | 3842742 | 58942728 ~ 58944217 (+) |
| G425224 | NA | other | downstream | 256992 | 63045090 ~ 63051530 (+) |
| nfil3-4 | LOC106614010 | other | downstream | 888316 | 63676409 ~ 63684848 (+) |
| sac3d1 | sac3d1 | other | downstream | 1388930 | 64177028 ~ 64183138 (+) |
| LOC110522985 | NA | other | downstream | 1455504 | 64243153 ~ 64244790 (+) |
| G427476 | NA | other | downstream | 2204003 | 64992101 ~ 64997138 (+) |
