G425086


Basic Information

Item Value
gene id G425086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62788213 ~ 62788412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU481569
GTCAGATTTCCAAGTTCTTACTCTGGATAAAGAAGGTAATCAACAAGAAAATATGTTAGGATTTATCCTGCAAAATGAACGTGCTAATATGCTAGTTTTGATTGCAGTCCAATTATTTTTATATTAATACCTACTCGTACTCCTGATGTTTTTCTTACATTGGGTGTCTATCTTTATTGTCTATGTTAAATGCATAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481569 True 200 lncRNA 0.31 1 62788213 62788412

Neighbor

gene id symbol gene type direction distance location
LOC110524272 LOC106613754 coding upstream 2636 62725130 ~ 62785594 (+)
LOC110524271 LOC106613753 coding upstream 41287 62689887 ~ 62746926 (+)
hcn2 LOC106613751 coding upstream 227662 62493156 ~ 62560551 (+)
bsg bsg coding upstream 297421 62476874 ~ 62490792 (+)
LOC110524274 LOC106613755 coding downstream 3567 62791979 ~ 62796480 (+)
LOC110524275 LOC105011538 coding downstream 9292 62797704 ~ 62802340 (+)
LOC110524276 LOC106613760 coding downstream 20509 62808921 ~ 62821203 (+)
LOC110524278 LOC106613761 coding downstream 96989 62885401 ~ 62892180 (+)
LOC110524284 LOC106613766 coding downstream 508671 63297083 ~ 63303403 (+)
G425085 NA non-coding upstream 115 62786959 ~ 62788098 (+)
G425058 NA non-coding upstream 15944 62733477 ~ 62772269 (+)
G424285 NA non-coding upstream 181576 62529327 ~ 62606637 (+)
G424288 NA non-coding upstream 184127 62533513 ~ 62604086 (+)
G425090 NA non-coding downstream 616 62789028 ~ 62789271 (+)
G425091 NA non-coding downstream 1924 62790336 ~ 62790704 (+)
G425097 NA non-coding downstream 24326 62812738 ~ 62812939 (+)
G425119 NA non-coding downstream 65615 62854027 ~ 62854240 (+)
G425136 NA non-coding downstream 106989 62895401 ~ 62900496 (+)
LOC110524265 LOC106613745 other upstream 481276 62283054 ~ 62327772 (+)
G424079 NA other upstream 682341 62105523 ~ 62105872 (+)
G423922 NA other upstream 1066189 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 2092308 60694220 ~ 60695905 (+)
G420634 NA other upstream 3843996 58942728 ~ 58944217 (+)
G425224 NA other downstream 256678 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 888002 63676409 ~ 63684848 (+)
sac3d1 sac3d1 other downstream 1388616 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 1455190 64243153 ~ 64244790 (+)
G427476 NA other downstream 2203689 64992101 ~ 64997138 (+)

Expression


Co-expression Network