G425090


Basic Information

Item Value
gene id G425090
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62789028 ~ 62789271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU481574
aaagagcaacaacaaaaaaatacaatatggggatgaggtagttgggtgtgctttttacagattggctgtgtacaggtacagtgatcggtaagatactctgacagctgatgcttaaagttagagagggagatataagtatttggattggagatgcttaatgtgagtctggaaggagagtttaaccaggcacctaggtatttgtagttgtccacatattctaagtcagaaccgtccagagtagtga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481574 True 244 lncRNA 0.41 1 62789028 62789271

Neighbor

gene id symbol gene type direction distance location
LOC110524272 LOC106613754 coding upstream 3451 62725130 ~ 62785594 (+)
LOC110524271 LOC106613753 coding upstream 42102 62689887 ~ 62746926 (+)
hcn2 LOC106613751 coding upstream 228477 62493156 ~ 62560551 (+)
bsg bsg coding upstream 298236 62476874 ~ 62490792 (+)
LOC110524274 LOC106613755 coding downstream 2708 62791979 ~ 62796480 (+)
LOC110524275 LOC105011538 coding downstream 8433 62797704 ~ 62802340 (+)
LOC110524276 LOC106613760 coding downstream 19650 62808921 ~ 62821203 (+)
LOC110524278 LOC106613761 coding downstream 96130 62885401 ~ 62892180 (+)
LOC110524284 LOC106613766 coding downstream 507812 63297083 ~ 63303403 (+)
G425086 NA non-coding upstream 616 62788213 ~ 62788412 (+)
G425085 NA non-coding upstream 930 62786959 ~ 62788098 (+)
G425058 NA non-coding upstream 16759 62733477 ~ 62772269 (+)
G424285 NA non-coding upstream 182391 62529327 ~ 62606637 (+)
G425091 NA non-coding downstream 1065 62790336 ~ 62790704 (+)
G425097 NA non-coding downstream 23467 62812738 ~ 62812939 (+)
G425119 NA non-coding downstream 64756 62854027 ~ 62854240 (+)
G425136 NA non-coding downstream 106130 62895401 ~ 62900496 (+)
G425165 LOC106613762 non-coding downstream 144986 62934257 ~ 62940159 (+)
LOC110524265 LOC106613745 other upstream 482091 62283054 ~ 62327772 (+)
G424079 NA other upstream 683156 62105523 ~ 62105872 (+)
G423922 NA other upstream 1067004 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 2093123 60694220 ~ 60695905 (+)
G420634 NA other upstream 3844811 58942728 ~ 58944217 (+)
G425224 NA other downstream 255819 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 887143 63676409 ~ 63684848 (+)
sac3d1 sac3d1 other downstream 1387757 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 1454331 64243153 ~ 64244790 (+)
G427476 NA other downstream 2202830 64992101 ~ 64997138 (+)

Expression


Co-expression Network