G425588



Basic Information


Item Value
gene id G425588
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62810693 ~ 62810905 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU482141
cactgtatgtgttgtcataCATGTGTTGTTTGCTCTAAAAGCTTCATTTATACGCCTTTCGACCGTGATATATAGGACTTAAGACGGAGAcagtaagaagacacagtggcagaataaattcaaccccACATTTGTTTTTTTCACAAAACCGGATAACAACCTCTGTCCAGTCCAGAAAGCAATTTGCATGTAAAGTAACAGACAGTTACATGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU482141 True 213 lncRNA 0.38 1 62810693 62810905

Neighbor


gene id symbol gene type direction distance location
LOC110524277 LOC106613757 coding downstream 2517 62803832 ~ 62808176 (-)
LOC118964634 NA coding downstream 13453 62796617 ~ 62797240 (-)
LOC110524270 LOC106613752 coding downstream 130478 62586238 ~ 62680215 (-)
LOC110524266 LOC106613746 coding downstream 368899 62328839 ~ 62441794 (-)
atp5f1d LOC106613744 coding downstream 528954 62277289 ~ 62281739 (-)
LOC110524279 LOC106613762 coding upstream 108673 62919578 ~ 63214903 (-)
LOC110524282 LOC106584262 coding upstream 446692 63257597 ~ 63260481 (-)
LOC110524283 LOC106613765 coding upstream 463726 63274631 ~ 63282648 (-)
btbd2a LOC106613767 coding upstream 492859 63303764 ~ 63314291 (-)
si:dkey-110c1.10 LOC106613769 coding upstream 569894 63380799 ~ 63402249 (-)
G425587 NA non-coding downstream 1361 62808559 ~ 62809332 (-)
G425568 NA non-coding downstream 14145 62795736 ~ 62796548 (-)
G424927 NA non-coding downstream 203880 62529316 ~ 62606813 (-)
G424903 NA non-coding downstream 315904 62494489 ~ 62494789 (-)
G424878 NA non-coding downstream 325117 62476932 ~ 62485576 (-)
G425593 NA non-coding upstream 3907 62814812 ~ 62815027 (-)
G425594 NA non-coding upstream 4620 62815525 ~ 62815727 (-)
G425609 NA non-coding upstream 32227 62843132 ~ 62843481 (-)
G425610 NA non-coding upstream 35804 62846709 ~ 62846927 (-)
G425611 NA non-coding upstream 38300 62849205 ~ 62849591 (-)
G424678 NA other downstream 809384 61998526 ~ 62001309 (-)
G424649 NA other downstream 883271 61888198 ~ 61927422 (-)
G424502 NA other downstream 1151108 61659033 ~ 61659585 (-)
G424499 LOC106613729 other downstream 1158918 61649967 ~ 61651775 (-)
G425612 NA other upstream 39099 62850004 ~ 62850247 (-)
G425647 NA other upstream 83754 62894659 ~ 62900503 (-)
G425810 LOC106613766 other upstream 490019 63300924 ~ 63303394 (-)
LOC110522986 LOC106613472 other upstream 1473063 64283744 ~ 64297376 (-)

Expression



Co-expression Network