Gene
RNA
| Item | Value |
|---|---|
| gene id | G425610 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 62846709 ~ 62846927 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU482166 | True | 219 | lncRNA | 0.51 | 1 | 62846709 | 62846927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524277 | LOC106613757 | coding | downstream | 38533 | 62803832 ~ 62808176 (-) |
| LOC118964634 | NA | coding | downstream | 49469 | 62796617 ~ 62797240 (-) |
| LOC110524270 | LOC106613752 | coding | downstream | 166494 | 62586238 ~ 62680215 (-) |
| LOC110524266 | LOC106613746 | coding | downstream | 404915 | 62328839 ~ 62441794 (-) |
| atp5f1d | LOC106613744 | coding | downstream | 564970 | 62277289 ~ 62281739 (-) |
| LOC110524279 | LOC106613762 | coding | upstream | 72651 | 62919578 ~ 63214903 (-) |
| LOC110524282 | LOC106584262 | coding | upstream | 410670 | 63257597 ~ 63260481 (-) |
| LOC110524283 | LOC106613765 | coding | upstream | 427704 | 63274631 ~ 63282648 (-) |
| btbd2a | LOC106613767 | coding | upstream | 456837 | 63303764 ~ 63314291 (-) |
| si:dkey-110c1.10 | LOC106613769 | coding | upstream | 533872 | 63380799 ~ 63402249 (-) |
| G425609 | NA | non-coding | downstream | 3228 | 62843132 ~ 62843481 (-) |
| G425594 | NA | non-coding | downstream | 30982 | 62815525 ~ 62815727 (-) |
| G425593 | NA | non-coding | downstream | 31682 | 62814812 ~ 62815027 (-) |
| G425588 | NA | non-coding | downstream | 35804 | 62810693 ~ 62810905 (-) |
| G425587 | NA | non-coding | downstream | 37377 | 62808559 ~ 62809332 (-) |
| G425611 | NA | non-coding | upstream | 2278 | 62849205 ~ 62849591 (-) |
| G425621 | NA | non-coding | upstream | 16807 | 62863734 ~ 62916723 (-) |
| G425623 | NA | non-coding | upstream | 71046 | 62917973 ~ 62918353 (-) |
| G425689 | NA | non-coding | upstream | 128088 | 62975015 ~ 62976051 (-) |
| G425713 | NA | non-coding | upstream | 180680 | 63027607 ~ 63030385 (-) |
| G424678 | NA | other | downstream | 845400 | 61998526 ~ 62001309 (-) |
| G424649 | NA | other | downstream | 919287 | 61888198 ~ 61927422 (-) |
| G424502 | NA | other | downstream | 1187124 | 61659033 ~ 61659585 (-) |
| G424499 | LOC106613729 | other | downstream | 1194934 | 61649967 ~ 61651775 (-) |
| G425612 | NA | other | upstream | 3077 | 62850004 ~ 62850247 (-) |
| G425647 | NA | other | upstream | 47732 | 62894659 ~ 62900503 (-) |
| G425810 | LOC106613766 | other | upstream | 453997 | 63300924 ~ 63303394 (-) |
| LOC110522986 | LOC106613472 | other | upstream | 1437041 | 64283744 ~ 64297376 (-) |
