G425647


Basic Information

Item Value
gene id G425647
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62894659 ~ 62900503 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU482212
gtttctttcctggagtgtgtttccggtgtcctggaacgcaccctgtctggttgccgggcgaattagcttgttgggagatcgatgttcacccgcacctgtatcccatcagtaatctgcacacctgtcctgatcatcacctctccccttcaaaagctctgacctgacatccattccctgccggatcgttagccatgaacattactcacccggatcatttaccccattcccgcctggtcgtcagaggattccgcttccccattggatccacctatttactcccatcaactcaccaccgctacccgctacaccacctggatatatctacccattcacattcacttgtaaataaattctcaccttcttcctactctccttgtcctggtctgcttctgggttcgattttgaagaatcgtgacagtCTGTTGCTGTCTCAGGTTCTTGTTTCTTACTGTGTTCTTTGTCTATCCTCTTCTGTTATGGACTGTTATGTTTTTGTAgagtctctctccatcatatcctactCTTCggttgtctgtctctttgtcttctCTCGAGTGTCTCTTTAGTTTTCCAATCCAAAACGGTCAAGGGGATACTGGGGTAACTTAACTTGTTTTGGCCTGTATCAGGGTCACCTAAATCATTGTCTTCCCTTCCATTTGTCTCTGGCTGCTGCTGTTCTAAATGCTCCACTGGTCTGCTGTTCTCTTCTGTCCTTGGCTCATCTGAAAGGTATCAAGGTAGAGGTGCAACATGTCATTAATTTGTTTTAAAGGGTGACGGCACGACCTGATTTGGCCTCCTTTTAGATTTGGTTAATTAAGAAATGCAAACAGCTATGATTGAATTCAAACGTGTGTTGGTTTCAGGGTGTGATTTGATGAGTGTGTTCATAGGTGGGAAGAGTTAGCCAAATTATTTTCTCAATTAGCTTTAGCTGACTGGTGTGCAACCTGACTTTGGCTTTGGATAGTCTAGCCCCGGGAttagttagggaccgtcaataaattacacaatgtaaattaGACAATATTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482212 True 1038 TUCP 0.45 2 62894659 62900503
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110524277 LOC106613757 coding downstream 86483 62803832 ~ 62808176 (-)
LOC118964634 NA coding downstream 97419 62796617 ~ 62797240 (-)
LOC110524270 LOC106613752 coding downstream 214444 62586238 ~ 62680215 (-)
LOC110524266 LOC106613746 coding downstream 452865 62328839 ~ 62441794 (-)
atp5f1d LOC106613744 coding downstream 612920 62277289 ~ 62281739 (-)
LOC110524279 LOC106613762 coding upstream 19075 62919578 ~ 63214903 (-)
LOC110524282 LOC106584262 coding upstream 357094 63257597 ~ 63260481 (-)
LOC110524283 LOC106613765 coding upstream 374128 63274631 ~ 63282648 (-)
btbd2a LOC106613767 coding upstream 403261 63303764 ~ 63314291 (-)
si:dkey-110c1.10 LOC106613769 coding upstream 480296 63380799 ~ 63402249 (-)
G425611 NA non-coding downstream 45068 62849205 ~ 62849591 (-)
G425610 NA non-coding downstream 47732 62846709 ~ 62846927 (-)
G425609 NA non-coding downstream 51178 62843132 ~ 62843481 (-)
G425594 NA non-coding downstream 78932 62815525 ~ 62815727 (-)
G425593 NA non-coding downstream 79632 62814812 ~ 62815027 (-)
G425623 NA non-coding upstream 17470 62917973 ~ 62918353 (-)
G425689 NA non-coding upstream 74512 62975015 ~ 62976051 (-)
G425713 NA non-coding upstream 127104 63027607 ~ 63030385 (-)
G425624 NA non-coding upstream 137321 63037824 ~ 63067194 (-)
G425751 NA non-coding upstream 209298 63109801 ~ 63119688 (-)
G425612 NA other downstream 44412 62850004 ~ 62850247 (-)
G424678 NA other downstream 893350 61998526 ~ 62001309 (-)
G424649 NA other downstream 967237 61888198 ~ 61927422 (-)
G424502 NA other downstream 1235074 61659033 ~ 61659585 (-)
G425810 LOC106613766 other upstream 400421 63300924 ~ 63303394 (-)
LOC110522986 LOC106613472 other upstream 1383465 64283744 ~ 64297376 (-)
G427287 NA other upstream 1666178 64566681 ~ 64568380 (-)
LOC110524330 LOC106613802 other upstream 1801371 64701867 ~ 64810664 (-)

Expression

G425647 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G425647 Expression in each Bioproject

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G425647 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G58565 LOC106561659 unknown NC_048565.1 CM023219.2 53139458 ~ 53140304 (-)
eurasian perch (Perca fluviatilis) G48763 NA non-coding NC_053116.1 CM020913.1 11230007 ~ 11230366 (+)