Gene
RNA
| Item | Value |
|---|---|
| gene id | G425218 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 63034813 ~ 63071017 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU481710 | False | 1683 | lncRNA | 0.40 | 2 | 63034813 | 63037380 |
| TU481712 | False | 1219 | lncRNA | 0.41 | 5 | 63034813 | 63071017 |
| TU481715 | False | 1228 | lncRNA | 0.41 | 3 | 63034813 | 63066308 |
| TU481713 | False | 672 | lncRNA | 0.41 | 2 | 63056486 | 63071017 |
| TU481714 | False | 1224 | lncRNA | 0.40 | 3 | 63062008 | 63071017 |
| TU481711 | True | 2472 | lncRNA | 0.41 | 4 | 63066837 | 63071017 |
63,012,000
63,016,000
63,020,000
63,024,000
63,028,000
63,032,000
63,036,000
63,040,000
63,044,000
63,048,000
63,052,000
63,056,000
63,060,000
63,064,000
63,068,000
63,072,000
63,076,000
63,080,000
63,084,000
63,088,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524278 | LOC106613761 | coding | upstream | 142633 | 62885401 ~ 62892180 (+) |
| LOC110524276 | LOC106613760 | coding | upstream | 213610 | 62808921 ~ 62821203 (+) |
| LOC110524275 | LOC105011538 | coding | upstream | 232473 | 62797704 ~ 62802340 (+) |
| LOC110524274 | LOC106613755 | coding | upstream | 238333 | 62791979 ~ 62796480 (+) |
| LOC110524272 | LOC106613754 | coding | upstream | 249236 | 62725130 ~ 62785594 (+) |
| LOC110524284 | LOC106613766 | coding | downstream | 226066 | 63297083 ~ 63303403 (+) |
| LOC118964772 | NA | coding | downstream | 229428 | 63300445 ~ 63300512 (+) |
| LOC110524287 | LOC106613768 | coding | downstream | 243519 | 63314536 ~ 63319938 (+) |
| unc13a | LOC106613770 | coding | downstream | 251522 | 63322539 ~ 63376215 (+) |
| foxq2 | LOC106614005 | coding | downstream | 483621 | 63554638 ~ 63557123 (+) |
| G425216 | NA | non-coding | upstream | 2311 | 63022670 ~ 63032502 (+) |
| G425165 | LOC106613762 | non-coding | upstream | 94654 | 62934257 ~ 62940159 (+) |
| G425136 | NA | non-coding | upstream | 134317 | 62895401 ~ 62900496 (+) |
| G425119 | NA | non-coding | upstream | 180573 | 62854027 ~ 62854240 (+) |
| G425097 | NA | non-coding | upstream | 221874 | 62812738 ~ 62812939 (+) |
| G425259 | NA | non-coding | downstream | 38046 | 63109063 ~ 63119375 (+) |
| G425260 | NA | non-coding | downstream | 39805 | 63110822 ~ 63113852 (+) |
| G425354 | NA | non-coding | downstream | 180486 | 63251503 ~ 63251829 (+) |
| G425359 | NA | non-coding | downstream | 185519 | 63256536 ~ 63256756 (+) |
| G425308 | NA | non-coding | downstream | 250761 | 63321778 ~ 63322263 (+) |
| LOC110524265 | LOC106613745 | other | upstream | 727876 | 62283054 ~ 62327772 (+) |
| G424079 | NA | other | upstream | 928941 | 62105523 ~ 62105872 (+) |
| G423922 | NA | other | upstream | 1312789 | 61721537 ~ 61722024 (+) |
| LOC110524226 | LOC106573564 | other | upstream | 2338908 | 60694220 ~ 60695905 (+) |
| G420634 | NA | other | upstream | 4090596 | 58942728 ~ 58944217 (+) |
| nfil3-4 | LOC106614010 | other | downstream | 605397 | 63676409 ~ 63684848 (+) |
| sac3d1 | sac3d1 | other | downstream | 1106011 | 64177028 ~ 64183138 (+) |
| LOC110522985 | NA | other | downstream | 1172585 | 64243153 ~ 64244790 (+) |
| G427476 | NA | other | downstream | 1921084 | 64992101 ~ 64997138 (+) |
| LOC110524338 | LOC106584398 | other | downstream | 1953698 | 65024444 ~ 65028828 (+) |
