G425624


Basic Information

Item Value
gene id G425624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63037824 ~ 63067194 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU482188
cactattctgtcagtttctgtttctctctctctttctctctttgtttctctctcagtttctctctctgtttctctcggtttctctctcagtttctctctatctttctctctttgtttctctctctgtttctctctctgcttctctctgtttctctctctgtttctctctcactattctgtcagtttctgtttctctctctgtttctctctctctttctctctttgtttctctctcagtttctctctctgtctctctcggtttctctctgtttctctctgtttctccctgtttctctctgtttctctctgtttctctctcacgattctgtcagtttctgtttctctctaatttctctctgtttctccctgtttctctctctgtttctctcggtttctctctctgtttctctctatctttctctttttgtttctatctctgtttctctcggtttttctctgtgtctctctgtgtttctctctcactattctgtcagtttctgtttctctctttgtttctctctctgtttctctctgtttctccctgtttctctctctgtttctctctgtttctctctctgtttctccctgtttctctctctgtttctctctgtttctctctctgtttctctctctgtttctctctctgtttctctctctgcttctctctgtttctctctctgtttctctctcactattctgtcagtttctatttctctctctgtttctctctctctttctctctctgtttctctctgtttctctctctgtttctctctgtttctctctgtttctctcactattctgtcagtttctgtttctctctctgtttctctctcttgtttctctcttactattctgtcagtttctgtttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482188 True 873 lncRNA 0.40 3 63037824 63067194

Neighbor

gene id symbol gene type direction distance location
LOC110524277 LOC106613757 coding downstream 229648 62803832 ~ 62808176 (-)
LOC118964634 NA coding downstream 240584 62796617 ~ 62797240 (-)
LOC110524270 LOC106613752 coding downstream 357609 62586238 ~ 62680215 (-)
LOC110524266 LOC106613746 coding downstream 596030 62328839 ~ 62441794 (-)
atp5f1d LOC106613744 coding downstream 756085 62277289 ~ 62281739 (-)
LOC110524282 LOC106584262 coding upstream 190403 63257597 ~ 63260481 (-)
LOC110524283 LOC106613765 coding upstream 207437 63274631 ~ 63282648 (-)
btbd2a LOC106613767 coding upstream 236570 63303764 ~ 63314291 (-)
si:dkey-110c1.10 LOC106613769 coding upstream 313605 63380799 ~ 63402249 (-)
LOC110524293 LOC106613771 coding upstream 335252 63402446 ~ 63409451 (-)
G425713 NA non-coding downstream 7439 63027607 ~ 63030385 (-)
G425689 NA non-coding downstream 61773 62975015 ~ 62976051 (-)
G425623 NA non-coding downstream 119471 62917973 ~ 62918353 (-)
G425621 NA non-coding downstream 121101 62863734 ~ 62916723 (-)
G425611 NA non-coding downstream 188233 62849205 ~ 62849591 (-)
G425751 NA non-coding upstream 42607 63109801 ~ 63119688 (-)
G425781 NA non-coding upstream 95199 63162393 ~ 63184460 (-)
G425870 NA non-coding upstream 202307 63269501 ~ 63269818 (-)
G425878 NA non-coding upstream 219878 63287072 ~ 63287395 (-)
G425647 NA other downstream 137321 62894659 ~ 62900503 (-)
G425612 NA other downstream 187577 62850004 ~ 62850247 (-)
G424678 NA other downstream 1036515 61998526 ~ 62001309 (-)
G424649 NA other downstream 1110402 61888198 ~ 61927422 (-)
G425810 LOC106613766 other upstream 233730 63300924 ~ 63303394 (-)
LOC110522986 LOC106613472 other upstream 1216774 64283744 ~ 64297376 (-)
G427287 NA other upstream 1499487 64566681 ~ 64568380 (-)
LOC110524330 LOC106613802 other upstream 1634680 64701867 ~ 64810664 (-)

Expression


Co-expression Network