G425892



Basic Information


Item Value
gene id G425892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63333058 ~ 63333575 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU482478
CTTTcctcgtctcctttccttcacCCACACATATCTCAAAGAGCTGGACAGGGAAAAGTGACGACGCCCACCTCCCCTGCATGTTTTTAGATTAGAACAACTGTAGGACAGCAGCGTGTAATAAAATAACTTAAAGGTAAGTTTCaaatgaaagagaggagacaaTGAAAGGAAGCTTATTGGGACGAACCCCCCATTGAGACCCCGAGTGGTGAACCAGGTAATGAAGCAGGTAAGgatgacagaacaggacaggagagaggctAGGTTACCTCATGGGTCTCTGGTTGTCGTAGTCCAGCTCTTGGATGGAGCCGTTGTAGGAGGTGTGCGAGGAGTAGCGCTGGTCTCTCTGGATGGGGTACTGGTGCATGGAGGCGTTGGGCTGAGACGTGGTGTAGAAGGGAGGGGGGATGCTGTTACTGGTCTCACTGCGGTAGTCGCTGTCTCTGTCGTCCACCGCACTGTCTGGGTCTTCGTCTACACAGGAAATGGTTGaaatgtgatgatgatgatca

Function


NR:

description
protein unc-13 homolog A-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU482478 True 518 lncRNA 0.51 1 63333058 63333575

Neighbor


gene id symbol gene type direction distance location
btbd2a LOC106613767 coding downstream 18767 63303764 ~ 63314291 (-)
LOC110524283 LOC106613765 coding downstream 50410 63274631 ~ 63282648 (-)
LOC110524282 LOC106584262 coding downstream 72577 63257597 ~ 63260481 (-)
LOC110524279 LOC106613762 coding downstream 118155 62919578 ~ 63214903 (-)
LOC110524277 LOC106613757 coding downstream 524882 62803832 ~ 62808176 (-)
si:dkey-110c1.10 LOC106613769 coding upstream 47224 63380799 ~ 63402249 (-)
LOC110524293 LOC106613771 coding upstream 68871 63402446 ~ 63409451 (-)
LOC110524290 LOC106613772 coding upstream 84389 63417964 ~ 63443429 (-)
LOC110524292 LOC106613773 coding upstream 128929 63462504 ~ 63491605 (-)
LOC110524297 LOC106613775 coding upstream 158852 63492427 ~ 63502367 (-)
G425886 NA non-coding downstream 10046 63322471 ~ 63323012 (-)
G425820 NA non-coding downstream 42281 63290446 ~ 63290777 (-)
G425881 NA non-coding downstream 43046 63289718 ~ 63290012 (-)
G425878 NA non-coding downstream 45663 63287072 ~ 63287395 (-)
G425870 NA non-coding downstream 63240 63269501 ~ 63269818 (-)
G425811 NA non-coding upstream 76223 63409798 ~ 63417187 (-)
G425962 NA non-coding upstream 177613 63511188 ~ 63511413 (-)
G425963 NA non-coding upstream 179325 63512900 ~ 63513962 (-)
G425964 NA non-coding upstream 182673 63516248 ~ 63516504 (-)
G425966 NA non-coding upstream 184946 63518521 ~ 63518796 (-)
G425810 LOC106613766 other downstream 29664 63300924 ~ 63303394 (-)
G425647 NA other downstream 432555 62894659 ~ 62900503 (-)
G425612 NA other downstream 482811 62850004 ~ 62850247 (-)
LOC110522986 LOC106613472 other upstream 950393 64283744 ~ 64297376 (-)
G427287 NA other upstream 1233106 64566681 ~ 64568380 (-)
LOC110524330 LOC106613802 other upstream 1368299 64701867 ~ 64810664 (-)
LOC110524332 LOC106613803 other upstream 1571470 64903039 ~ 64911196 (-)
G427902 ubxn6 other upstream 1666133 64999708 ~ 65011598 (-)

Expression



Co-expression Network