G425385


Basic Information

Item Value
gene id G425385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63376679 ~ 63378116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU481905
gtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctatctatctatctatctatctatctatctatctatctaccctgTTACAGAGCCTGCTGCCTGAAACCCTCTAATGCCTTGTCCTGTCAAACCTGTTGTCTGTCTTCAGTACATAGTGAGAGCAACCTGATGAAGACAAGCCTCGGAGCTCTGTGGTTCATCAGCACGTGTGTGGGTGTATGTTCAAGAGAAGGAGATGAATGAGTGTGTATACAGGTGTGCTATCTTAATTTGAACAGTTTctcaggaaatgtgaattactatgtggattataattaatggacatttttgtaggggtttcTAAATGTTTAGTTAGGATAAttaaagtctgacattttaaagtggaaatgacaaacatTAGAAGCATTTTTAATCCTTGAATATATTACAATTTGCATTTGCTGCAGCGCCGGAAAAAAAATCTGcgacaacagagtgatcaaattaagatattaCATCTGTATACTGTTTGTGTGTTATATTGTTACAATGTTGACCTTGTGTAGACACCAGTGTTGCCTGTTTGTGTAAATGTGTAAATCACAGAAAGCCATCAAGAACATAGAACACATTATAGTGGAAGAACACATAGTCTATAGTATATTTAGATTATTTGAGAATTTCCTAAGTGTCTTTTACTTGGTGGAATGCAAGTCAACATTTTTGGTTGAAGGTTTATTGCTTGtttgatcagaaacatttagtgGGCTGTACAGTACAGAGTATAAACAGAGCTCCATTAGTTTGCCTTGGAAAACAGCCACCTCCTCTCCTTTAACCTCTCTGATCAACATGTGTCAGCGTGGAAGAGAGCAGCTAGAGACAAAACACAGACATTTCTTACCGCTTGTGTTGCCATAGCAACCTCTTGTCAAATGAAGATGTCAGGCCACGGGTGACCCCCACGGtctctttttttttgtctttcttcccctctgctGGGGGAAGCACACATGACCTATAACCTTTTACCTAGAATGGCCAGGCTGTCTGGTCCTGGTTCTGAGCACACAGGGTCTGTCCACAAGGGCTATAGTACAGAACTGCTCCTGCCTGCCCTCTGCAATGGTGAAACTTTCCATAGATATGTGACTGAGATAGCTATGTGGGGGGAAATCTCATAACATCCATGGCTCTCACATTTAGAAGAAGCACATAGAAAGCATGCAAAGAGTAGTAAGCACAGGGAAGGGTAGTAAGCACATGGAAGGGTAGTAAGCACAGGGAAGGGTAGTAAGCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU481905 True 1286 lncRNA 0.41 2 63376679 63378116

Neighbor

gene id symbol gene type direction distance location
unc13a LOC106613770 coding upstream 464 63322539 ~ 63376215 (+)
LOC110524287 LOC106613768 coding upstream 56741 63314536 ~ 63319938 (+)
LOC110524284 LOC106613766 coding upstream 73276 63297083 ~ 63303403 (+)
LOC118964772 NA coding upstream 76167 63300445 ~ 63300512 (+)
LOC110524278 LOC106613761 coding upstream 484499 62885401 ~ 62892180 (+)
foxq2 LOC106614005 coding downstream 176522 63554638 ~ 63557123 (+)
onecut3a LOC106613776 coding downstream 235781 63613897 ~ 63637179 (+)
si:dkey-172o19.2 LOC106614009 coding downstream 292085 63670201 ~ 63672004 (+)
nfil3-4 LOC106614010 coding downstream 298293 63676409 ~ 63684848 (+)
peak3 oaz1 coding downstream 411008 63789124 ~ 63829666 (+)
G425308 NA non-coding upstream 54416 63321778 ~ 63322263 (+)
G425359 NA non-coding upstream 119923 63256536 ~ 63256756 (+)
G425354 NA non-coding upstream 124850 63251503 ~ 63251829 (+)
G425259 NA non-coding upstream 257304 63109063 ~ 63119375 (+)
G425260 NA non-coding upstream 262827 63110822 ~ 63113852 (+)
G425415 NA non-coding downstream 11934 63390050 ~ 63392234 (+)
G425431 NA non-coding downstream 31697 63409813 ~ 63417222 (+)
G425387 NA non-coding downstream 52701 63430817 ~ 63431584 (+)
G425466 NA non-coding downstream 85996 63464112 ~ 63466056 (+)
G425433 LOC106613775 non-coding downstream 116665 63494781 ~ 63495693 (+)
G425224 NA other upstream 325149 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1069742 62283054 ~ 62327772 (+)
G424079 NA other upstream 1270807 62105523 ~ 62105872 (+)
G423922 NA other upstream 1654655 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 2680774 60694220 ~ 60695905 (+)
sac3d1 sac3d1 other downstream 798912 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 865486 64243153 ~ 64244790 (+)
G427476 NA other downstream 1613985 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 1646599 65024444 ~ 65028828 (+)

Expression


Co-expression Network