G425431


Basic Information

Item Value
gene id G425431
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63409813 ~ 63417222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU481956
ACGCATTAATAAATATTTTTGGGAACTTCTCAAAATAACTTTCACACAATCGTATCAACGAGTTTGCCACCCAAACGCTGCATTGTGTAGAATAATGACAAAGACAGTAATTAAATGACATTTATTGACATTAAATAACAAAACAGCATTCAAGCTAACATGACATCCTTTTGTGCAAACCCCTACAAGCTCTGTGTCGCGTCATTCCACTTTAGCCAACGCAGAAAGAGCAAGCACTCCACCCATGCCCATCTCCAAGTCATAGTCAATCTGAGCCATAGAGGTGACTCTAGTCGTCCTTGAACTTGCCGTTGATATAGGGCACCCAGTCCAGGATCAGCCTCCAGTCTGTAAAGTAGACAAGGGCAACTCCGCCCACCGACCCCCAACCAGCCATTGTGGGAACCCTGGACAAGTCCTGGCGATGGCAATGTACTTAGCCCCAATCAACTTCTTTAGCACTTGCACCATTCTGAACTGATTGAGCTATAAGAAGATTCTGACCTTCCCCTCAAAcacggtcgtcactagttaccacagccacacaAGTTATAAACCC

Function

NR:

description
ubiquinol-cytochrome c reductase subunit-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU481956 True 559 lncRNA 0.45 3 63409813 63417222

Neighbor

gene id symbol gene type direction distance location
unc13a LOC106613770 coding upstream 33598 63322539 ~ 63376215 (+)
LOC110524287 LOC106613768 coding upstream 89875 63314536 ~ 63319938 (+)
LOC110524284 LOC106613766 coding upstream 106410 63297083 ~ 63303403 (+)
LOC118964772 NA coding upstream 109301 63300445 ~ 63300512 (+)
LOC110524278 LOC106613761 coding upstream 517633 62885401 ~ 62892180 (+)
foxq2 LOC106614005 coding downstream 137416 63554638 ~ 63557123 (+)
onecut3a LOC106613776 coding downstream 196675 63613897 ~ 63637179 (+)
si:dkey-172o19.2 LOC106614009 coding downstream 252979 63670201 ~ 63672004 (+)
nfil3-4 LOC106614010 coding downstream 259187 63676409 ~ 63684848 (+)
peak3 oaz1 coding downstream 371902 63789124 ~ 63829666 (+)
G425415 NA non-coding upstream 17579 63390050 ~ 63392234 (+)
G425385 NA non-coding upstream 31697 63376679 ~ 63378116 (+)
G425308 NA non-coding upstream 87550 63321778 ~ 63322263 (+)
G425359 NA non-coding upstream 153057 63256536 ~ 63256756 (+)
G425354 NA non-coding upstream 157984 63251503 ~ 63251829 (+)
G425387 NA non-coding downstream 13595 63430817 ~ 63431584 (+)
G425466 NA non-coding downstream 46890 63464112 ~ 63466056 (+)
G425433 LOC106613775 non-coding downstream 77559 63494781 ~ 63495693 (+)
G425434 NA non-coding downstream 85519 63502741 ~ 63504186 (+)
G425497 LOC106613774 non-coding downstream 110629 63527851 ~ 63528223 (+)
G425224 NA other upstream 358283 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1102876 62283054 ~ 62327772 (+)
G424079 NA other upstream 1303941 62105523 ~ 62105872 (+)
G423922 NA other upstream 1687789 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 2713908 60694220 ~ 60695905 (+)
sac3d1 sac3d1 other downstream 759806 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 826380 64243153 ~ 64244790 (+)
G427476 NA other downstream 1574879 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 1607493 65024444 ~ 65028828 (+)

Expression


Co-expression Network