G425387


Basic Information

Item Value
gene id G425387
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63430817 ~ 63431584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU481907
CGTCCCCccagtctccctctgtctgtctgtccgtgtccctctgtctgtccgtccgtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccctctgtctgtccgtcagtgtccccgtgtctgtgtctgtctgtgtccctctgtctgtccgtgtccccgtgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtgtctgtctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481907 True 616 lncRNA 0.56 2 63430817 63431584

Neighbor

gene id symbol gene type direction distance location
unc13a LOC106613770 coding upstream 54602 63322539 ~ 63376215 (+)
LOC110524287 LOC106613768 coding upstream 110879 63314536 ~ 63319938 (+)
LOC110524284 LOC106613766 coding upstream 127414 63297083 ~ 63303403 (+)
LOC118964772 NA coding upstream 130305 63300445 ~ 63300512 (+)
LOC110524278 LOC106613761 coding upstream 538637 62885401 ~ 62892180 (+)
foxq2 LOC106614005 coding downstream 123054 63554638 ~ 63557123 (+)
onecut3a LOC106613776 coding downstream 182313 63613897 ~ 63637179 (+)
si:dkey-172o19.2 LOC106614009 coding downstream 238617 63670201 ~ 63672004 (+)
nfil3-4 LOC106614010 coding downstream 244825 63676409 ~ 63684848 (+)
peak3 oaz1 coding downstream 357540 63789124 ~ 63829666 (+)
G425431 NA non-coding upstream 13595 63409813 ~ 63417222 (+)
G425415 NA non-coding upstream 38583 63390050 ~ 63392234 (+)
G425385 NA non-coding upstream 52701 63376679 ~ 63378116 (+)
G425308 NA non-coding upstream 108554 63321778 ~ 63322263 (+)
G425359 NA non-coding upstream 174061 63256536 ~ 63256756 (+)
G425466 NA non-coding downstream 32528 63464112 ~ 63466056 (+)
G425433 LOC106613775 non-coding downstream 63197 63494781 ~ 63495693 (+)
G425434 NA non-coding downstream 71157 63502741 ~ 63504186 (+)
G425497 LOC106613774 non-coding downstream 96267 63527851 ~ 63528223 (+)
G425505 NA non-coding downstream 102829 63534413 ~ 63535221 (+)
G425224 NA other upstream 379287 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1123880 62283054 ~ 62327772 (+)
G424079 NA other upstream 1324945 62105523 ~ 62105872 (+)
G423922 NA other upstream 1708793 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 2734912 60694220 ~ 60695905 (+)
sac3d1 sac3d1 other downstream 745444 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 812018 64243153 ~ 64244790 (+)
G427476 NA other downstream 1560517 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 1593131 65024444 ~ 65028828 (+)

Expression


Co-expression Network