G425497 (LOC106613774)


Basic Information

Item Value
gene id G425497
gene name LOC106613774
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63527851 ~ 63528223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU482044
AGCTCTGTTGGCGGCAACAGCGTCTCCAGAGTTTGGTAGAAGGGCAGCGACACCAGCTTGACCTCAGCCGCAGGTGTGGAGGACAGCTTGGGGATGCCGTTGAGGTAGTCTGCGCCCTGAGTGCCTGTGGGGGACGAGCTGAGGGAGGAGTAGGCCACCGGAACCCCCTCCGGGCGCCGAGCAGCCAGCCAACCTGACGCCTTGGGGAAGCGTGACTCGTACAGCTGCCGCACGTTCTTCAGCAGCTCTGGGCTGTACTCTGTCTGCACCAGCCTCAGCGCCCGTCCCACCAGATCATGCTTTAGACCACTCTTACTCCGGCCCATGGAGGCCAGCAGCGTCTGCAGGTCAGAAACCCGGAAACTCTTCACCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482044 True 373 lncRNA 0.63 1 63527851 63528223

Neighbor

gene id symbol gene type direction distance location
unc13a LOC106613770 coding upstream 151636 63322539 ~ 63376215 (+)
LOC110524287 LOC106613768 coding upstream 207913 63314536 ~ 63319938 (+)
LOC110524284 LOC106613766 coding upstream 224448 63297083 ~ 63303403 (+)
LOC118964772 NA coding upstream 227339 63300445 ~ 63300512 (+)
LOC110524278 LOC106613761 coding upstream 635671 62885401 ~ 62892180 (+)
foxq2 LOC106614005 coding downstream 26415 63554638 ~ 63557123 (+)
onecut3a LOC106613776 coding downstream 85674 63613897 ~ 63637179 (+)
si:dkey-172o19.2 LOC106614009 coding downstream 141978 63670201 ~ 63672004 (+)
nfil3-4 LOC106614010 coding downstream 148186 63676409 ~ 63684848 (+)
peak3 oaz1 coding downstream 260901 63789124 ~ 63829666 (+)
G425434 NA non-coding upstream 23665 63502741 ~ 63504186 (+)
G425433 LOC106613775 non-coding upstream 32158 63494781 ~ 63495693 (+)
G425466 NA non-coding upstream 61795 63464112 ~ 63466056 (+)
G425387 NA non-coding upstream 96267 63430817 ~ 63431584 (+)
G425431 NA non-coding upstream 110629 63409813 ~ 63417222 (+)
G425505 NA non-coding downstream 6190 63534413 ~ 63535221 (+)
LOC110524307 NA non-coding downstream 288462 63816548 ~ 63818313 (+)
G426172 NA non-coding downstream 294514 63822737 ~ 63823909 (+)
G426248 NA non-coding downstream 339242 63867465 ~ 63867704 (+)
G425224 NA other upstream 476321 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1220914 62283054 ~ 62327772 (+)
G424079 NA other upstream 1421979 62105523 ~ 62105872 (+)
G423922 NA other upstream 1805827 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 2831946 60694220 ~ 60695905 (+)
sac3d1 sac3d1 other downstream 648805 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 715379 64243153 ~ 64244790 (+)
G427476 NA other downstream 1463878 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 1496492 65024444 ~ 65028828 (+)

Expression


Co-expression Network