G426278


Basic Information

Item Value
gene id G426278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63913585 ~ 63915197 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU482889
ATGACCTGGCCTGGTGTTTCTGCATGCTACCGCTGCCTGGGTTGCCTAGCATCTTCTTGTACATGGCCTGCTCGGCATCTTTCTGCTCAGAGTGCTTCTTCACCAGCTTGGAGAGTTCTGAGTGGATGGTCTTGTTGCTTGGTTCCAACTTCAGGGCCATCTTCAAATTCCTTATAGCGTC

Function

NR:

description
peptidyl-prolyl cis-trans isomerase FKBP8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482889 True 181 lncRNA 0.51 2 63913585 63915197

Neighbor

gene id symbol gene type direction distance location
LOC110524307 NA coding upstream 95585 63816548 ~ 63818313 (+)
peak3 oaz1 coding upstream 114918 63789124 ~ 63829666 (+)
nfil3-4 LOC106614010 coding upstream 228737 63676409 ~ 63684848 (+)
si:dkey-172o19.2 LOC106614009 coding upstream 241581 63670201 ~ 63672004 (+)
onecut3a LOC106613776 coding upstream 276406 63613897 ~ 63637179 (+)
crlf1b LOC106613786 coding downstream 230899 64146096 ~ 64158106 (+)
sac3d1 sac3d1 coding downstream 261858 64177028 ~ 64183138 (+)
LOC110524317 LOC106613471 coding downstream 269250 64184447 ~ 64237088 (+)
LOC110522985 NA coding downstream 327956 64243153 ~ 64244790 (+)
shc2 LOC106613792 coding downstream 332300 64247497 ~ 64275959 (+)
G426173 NA non-coding upstream 41490 63869376 ~ 63872095 (+)
G426248 NA non-coding upstream 45881 63867465 ~ 63867704 (+)
G426172 NA non-coding upstream 89676 63822737 ~ 63823909 (+)
G426283 NA non-coding downstream 14069 63929266 ~ 63932609 (+)
G426287 NA non-coding downstream 25333 63940530 ~ 63943183 (+)
G426340 NA non-coding downstream 123170 64038367 ~ 64086741 (+)
G426380 NA non-coding downstream 178439 64093636 ~ 64093875 (+)
G426395 NA non-coding downstream 209013 64124210 ~ 64124596 (+)
G425224 NA other upstream 862055 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1606648 62283054 ~ 62327772 (+)
G424079 NA other upstream 1807713 62105523 ~ 62105872 (+)
G423922 NA other upstream 2191561 61721537 ~ 61722024 (+)
G427476 NA other downstream 1076904 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 1109518 65024444 ~ 65028828 (+)
G427747 NA other downstream 1538659 65453856 ~ 65521380 (+)

Expression


Co-expression Network