G426340


Basic Information

Item Value
gene id G426340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 64038367 ~ 64086741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU482955
agagggtagtgcgtacggcccagtacatcactggggccaagcttcctgccatccaggacctctataccaggcggtgtcagaggcaggccctaaaaATTGTCAAAAGCGAGTGGGGCATACTTAGTAAGTTTTTTTTTGTGATGCATGCACTATTGAATTGTCATACTATTATGCATTCATCAcgtcacccctacctacatgtacaaattacctcaacttacctgtaccccagcacactgactcagaacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482955 True 249 lncRNA 0.47 2 64038367 64086741

Neighbor

gene id symbol gene type direction distance location
LOC110524307 NA coding upstream 220367 63816548 ~ 63818313 (+)
peak3 oaz1 coding upstream 239700 63789124 ~ 63829666 (+)
nfil3-4 LOC106614010 coding upstream 353519 63676409 ~ 63684848 (+)
si:dkey-172o19.2 LOC106614009 coding upstream 366363 63670201 ~ 63672004 (+)
onecut3a LOC106613776 coding upstream 401188 63613897 ~ 63637179 (+)
crlf1b LOC106613786 coding downstream 59355 64146096 ~ 64158106 (+)
sac3d1 sac3d1 coding downstream 90314 64177028 ~ 64183138 (+)
LOC110524317 LOC106613471 coding downstream 97706 64184447 ~ 64237088 (+)
LOC110522985 NA coding downstream 156412 64243153 ~ 64244790 (+)
shc2 LOC106613792 coding downstream 160756 64247497 ~ 64275959 (+)
G426287 NA non-coding upstream 95184 63940530 ~ 63943183 (+)
G426283 NA non-coding upstream 105758 63929266 ~ 63932609 (+)
G426278 NA non-coding upstream 123170 63913585 ~ 63915197 (+)
G426173 NA non-coding upstream 166272 63869376 ~ 63872095 (+)
G426248 NA non-coding upstream 170663 63867465 ~ 63867704 (+)
G426380 NA non-coding downstream 6895 64093636 ~ 64093875 (+)
G426395 NA non-coding downstream 37469 64124210 ~ 64124596 (+)
G426441 NA non-coding downstream 123429 64210170 ~ 64214053 (+)
G426453 NA non-coding downstream 155203 64241944 ~ 64242197 (+)
G426458 NA non-coding downstream 163401 64250142 ~ 64250504 (+)
G425224 NA other upstream 986837 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1731430 62283054 ~ 62327772 (+)
G424079 NA other upstream 1932495 62105523 ~ 62105872 (+)
G423922 NA other upstream 2316343 61721537 ~ 61722024 (+)
G427476 NA other downstream 905360 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 937974 65024444 ~ 65028828 (+)
G427747 NA other downstream 1367115 65453856 ~ 65521380 (+)

Expression


Co-expression Network