G426380


Basic Information

Item Value
gene id G426380
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 64093636 ~ 64093875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU482995
GTGAGTGCATGCTCACGCAGATTGTTTGTTGTTATAACTTAGagaatcaaagtttattggtcgcgtacacaggtTTGCAAGTGTAATAgctgcttgtgttactagctccaacattacagtagaatgtcttgtgttactagctccaacagtacagtagaatgtattgtgttactagctccaacagtgcagtagaatgtcttgtgttactagctccaacagtacagtagaatgtcttgtgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482995 True 240 lncRNA 0.40 1 64093636 64093875

Neighbor

gene id symbol gene type direction distance location
LOC110524307 NA coding upstream 275636 63816548 ~ 63818313 (+)
peak3 oaz1 coding upstream 294969 63789124 ~ 63829666 (+)
nfil3-4 LOC106614010 coding upstream 408788 63676409 ~ 63684848 (+)
si:dkey-172o19.2 LOC106614009 coding upstream 421632 63670201 ~ 63672004 (+)
onecut3a LOC106613776 coding upstream 456457 63613897 ~ 63637179 (+)
crlf1b LOC106613786 coding downstream 52221 64146096 ~ 64158106 (+)
sac3d1 sac3d1 coding downstream 83180 64177028 ~ 64183138 (+)
LOC110524317 LOC106613471 coding downstream 90572 64184447 ~ 64237088 (+)
LOC110522985 NA coding downstream 149278 64243153 ~ 64244790 (+)
shc2 LOC106613792 coding downstream 153622 64247497 ~ 64275959 (+)
G426340 NA non-coding upstream 6895 64038367 ~ 64086741 (+)
G426287 NA non-coding upstream 150453 63940530 ~ 63943183 (+)
G426283 NA non-coding upstream 161027 63929266 ~ 63932609 (+)
G426278 NA non-coding upstream 178439 63913585 ~ 63915197 (+)
G426173 NA non-coding upstream 221541 63869376 ~ 63872095 (+)
G426395 NA non-coding downstream 30335 64124210 ~ 64124596 (+)
G426441 NA non-coding downstream 116295 64210170 ~ 64214053 (+)
G426453 NA non-coding downstream 148069 64241944 ~ 64242197 (+)
G426458 NA non-coding downstream 156267 64250142 ~ 64250504 (+)
G426465 NA non-coding downstream 166627 64260502 ~ 64260741 (+)
G425224 NA other upstream 1042106 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1786699 62283054 ~ 62327772 (+)
G424079 NA other upstream 1987764 62105523 ~ 62105872 (+)
G423922 NA other upstream 2371612 61721537 ~ 61722024 (+)
G427476 NA other downstream 898226 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 930840 65024444 ~ 65028828 (+)
G427747 NA other downstream 1359981 65453856 ~ 65521380 (+)

Expression


Co-expression Network