G426395


Basic Information

Item Value
gene id G426395
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 64124210 ~ 64124596 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU483011
tgaagtttgctagagagcatttggatgatccagaagaagattgggagaatgtcatatggtcagatgaaaccaaaatataactttttggtaaaaactcaactcgtcgtatttggaggacaaagaatgctgagttgcatccaaagaacaccatacctactgtgaagtatgggggtggaaacatcatgctttggggctgtttttctgcaaagggaccagggcgactgatctgtgtaaaggaaagaatgagggcattgaagatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacaccgcccaggcaatgaaggagtggcttcgtaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483011 True 336 lncRNA 0.44 2 64124210 64124596

Neighbor

gene id symbol gene type direction distance location
LOC110524307 NA coding upstream 306210 63816548 ~ 63818313 (+)
peak3 oaz1 coding upstream 325543 63789124 ~ 63829666 (+)
nfil3-4 LOC106614010 coding upstream 439362 63676409 ~ 63684848 (+)
si:dkey-172o19.2 LOC106614009 coding upstream 452206 63670201 ~ 63672004 (+)
onecut3a LOC106613776 coding upstream 487031 63613897 ~ 63637179 (+)
crlf1b LOC106613786 coding downstream 21500 64146096 ~ 64158106 (+)
sac3d1 sac3d1 coding downstream 52459 64177028 ~ 64183138 (+)
LOC110524317 LOC106613471 coding downstream 59851 64184447 ~ 64237088 (+)
LOC110522985 NA coding downstream 118557 64243153 ~ 64244790 (+)
shc2 LOC106613792 coding downstream 122901 64247497 ~ 64275959 (+)
G426380 NA non-coding upstream 30335 64093636 ~ 64093875 (+)
G426340 NA non-coding upstream 37469 64038367 ~ 64086741 (+)
G426287 NA non-coding upstream 181027 63940530 ~ 63943183 (+)
G426283 NA non-coding upstream 191601 63929266 ~ 63932609 (+)
G426278 NA non-coding upstream 209013 63913585 ~ 63915197 (+)
G426441 NA non-coding downstream 85574 64210170 ~ 64214053 (+)
G426453 NA non-coding downstream 117348 64241944 ~ 64242197 (+)
G426458 NA non-coding downstream 125546 64250142 ~ 64250504 (+)
G426465 NA non-coding downstream 135906 64260502 ~ 64260741 (+)
G426467 NA non-coding downstream 136558 64261154 ~ 64262621 (+)
G425224 NA other upstream 1072680 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1817273 62283054 ~ 62327772 (+)
G424079 NA other upstream 2018338 62105523 ~ 62105872 (+)
G423922 NA other upstream 2402186 61721537 ~ 61722024 (+)
G427476 NA other downstream 867505 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 900119 65024444 ~ 65028828 (+)
G427747 NA other downstream 1329260 65453856 ~ 65521380 (+)

Expression


Co-expression Network