G426467


Basic Information

Item Value
gene id G426467
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 64261154 ~ 64262621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU483097
cttttttaacaaatcaaaacctgaaaaattgggcgtgcaaaattattcagccccctttagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaatgttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgaatggatgcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccgttgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaaaaaaagcaggcccaaaccattatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggaaagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactgtcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggaaagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgtttcacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatatc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483097 True 1468 lncRNA 0.42 1 64261154 64262621

Neighbor

gene id symbol gene type direction distance location
LOC110522985 NA coding upstream 16364 64243153 ~ 64244790 (+)
LOC110524317 LOC106613471 coding upstream 24066 64184447 ~ 64237088 (+)
sac3d1 sac3d1 coding upstream 78016 64177028 ~ 64183138 (+)
crlf1b LOC106613786 coding upstream 103048 64146096 ~ 64158106 (+)
LOC110524307 NA coding upstream 443154 63816548 ~ 63818313 (+)
LOC110524320 LOC100196527 coding downstream 34838 64297442 ~ 64325608 (+)
LOC118964637 NA coding downstream 71336 64333957 ~ 64337948 (+)
LOC110524324 LOC106613796 coding downstream 154177 64416798 ~ 64448606 (+)
LOC110524325 lpp2 coding downstream 198314 64460935 ~ 64494141 (+)
tle2a LOC106613798 coding downstream 257676 64520297 ~ 64568404 (+)
G426465 NA non-coding upstream 413 64260502 ~ 64260741 (+)
G426458 NA non-coding upstream 10650 64250142 ~ 64250504 (+)
G426453 NA non-coding upstream 18957 64241944 ~ 64242197 (+)
G426441 NA non-coding upstream 47101 64210170 ~ 64214053 (+)
G426395 NA non-coding upstream 136558 64124210 ~ 64124596 (+)
G426564 NA non-coding downstream 155598 64418219 ~ 64466996 (+)
G426562 NA non-coding downstream 185117 64447738 ~ 64494125 (+)
G427024 NA non-coding downstream 243596 64506217 ~ 64506421 (+)
G427031 NA non-coding downstream 247270 64509891 ~ 64510217 (+)
nfil3-4 LOC106614010 other upstream 576915 63676409 ~ 63684848 (+)
G425224 NA other upstream 1209624 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 1954217 62283054 ~ 62327772 (+)
G427476 NA other downstream 729480 64992101 ~ 64997138 (+)
LOC110524338 LOC106584398 other downstream 762094 65024444 ~ 65028828 (+)
G427747 NA other downstream 1191235 65453856 ~ 65521380 (+)
G428696 NA other downstream 1879458 66142079 ~ 66142605 (+)
G429156 NA other downstream 2719328 66981949 ~ 67048164 (+)

Expression


Co-expression Network