G427360



Basic Information


Item Value
gene id G427360
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 64718887 ~ 64775461 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU484113
gacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgaactgaaggtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggagtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcatcattggat

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU484113 True 415 lncRNA 0.45 2 64718887 64775461

Neighbor


gene id symbol gene type direction distance location
LOC110524329 LOC106613801 coding downstream 17492 64664327 ~ 64701395 (-)
LOC110524326 LOC106613800 coding downstream 74813 64568484 ~ 64644074 (-)
trnaq-uug NA coding downstream 204065 64514751 ~ 64514822 (-)
LOC110524323 LOC106613797 coding downstream 302130 64407229 ~ 64416757 (-)
LOC110524322 LOC106584412 coding downstream 336341 64377557 ~ 64382546 (-)
LOC110524332 LOC106613803 coding upstream 127578 64903039 ~ 64911196 (-)
LOC110524333 LOC106613805 coding upstream 154383 64929844 ~ 64947418 (-)
LOC110524334 LOC106613806 coding upstream 163805 64939266 ~ 64982684 (-)
LOC110524335 LOC106584403 coding upstream 207880 64983341 ~ 64991018 (-)
LOC110524336 chaf1a coding upstream 236178 65011639 ~ 65022842 (-)
G427037 NA non-coding downstream 205137 64513454 ~ 64513750 (-)
G427033 NA non-coding downstream 208837 64509775 ~ 64510050 (-)
G427030 NA non-coding downstream 209123 64509545 ~ 64509764 (-)
G427023 NA non-coding downstream 214392 64504107 ~ 64504495 (-)
G427386 NA non-coding upstream 4414 64779875 ~ 64780140 (-)
G427909 NA non-coding upstream 150809 64926270 ~ 64926746 (-)
G427910 NA non-coding upstream 152311 64927772 ~ 64928219 (-)
G427906 NA non-coding upstream 218644 64994105 ~ 64997116 (-)
G427287 NA other downstream 150507 64566681 ~ 64568380 (-)
LOC110522986 LOC106613472 other downstream 432528 64283744 ~ 64297376 (-)
G425810 LOC106613766 other downstream 1415493 63300924 ~ 63303394 (-)
LOC110524282 LOC106584262 other downstream 1458418 63257597 ~ 63260481 (-)
G425647 NA other downstream 1818384 62894659 ~ 62900503 (-)
G427902 ubxn6 other upstream 224247 64999708 ~ 65011598 (-)
G428132 NA other upstream 594655 65370116 ~ 65382590 (-)
LOC110524398 LOC106613863 other upstream 2011590 66786837 ~ 66793995 (-)
lrrc7 LOC106613881 other upstream 3035144 67810595 ~ 67983549 (-)

Expression



Co-expression Network