G427492


Basic Information

Item Value
gene id G427492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 64929111 ~ 64929324 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU484265
GAATAAATAAGGAAGCTATAGTAGTACAGCATGCGTTTTTGTTAAGGATTCAGTTGAGGAACACATCAGTAAATCATTTAGGTCGCCACCACCCCAGCTCTTAGGATGACTGCAGGGTACAAATCTCATCAACTGACCTCTGTCCTCAAAAAATGGCTAAAACCATTTGGATCAAGACCCTTAGACTGTGATGTTAATCTAAAGTTAAGTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484265 True 214 lncRNA 0.39 1 64929111 64929324

Neighbor

gene id symbol gene type direction distance location
LOC110524331 LOC105011595 coding upstream 86256 64811241 ~ 64842855 (+)
tle2a LOC106613798 coding upstream 360707 64520297 ~ 64568404 (+)
LOC110524325 lpp2 coding upstream 434970 64460935 ~ 64494141 (+)
LOC110524324 LOC106613796 coding upstream 480505 64416798 ~ 64448606 (+)
LOC118964637 NA coding upstream 591163 64333957 ~ 64337948 (+)
LOC110524337 ubxn6 coding downstream 70342 64998569 ~ 65011606 (+)
LOC110524338 LOC106584398 coding downstream 95120 65024444 ~ 65028828 (+)
LOC110524340 fsd1 coding downstream 122956 65052280 ~ 65060054 (+)
mpnd LOC106591182 coding downstream 154417 65083741 ~ 65090497 (+)
LOC110522880 NA coding downstream 245854 65175178 ~ 65177361 (+)
G427491 NA non-coding upstream 19 64928434 ~ 64929092 (+)
G427490 NA non-coding upstream 1322 64926912 ~ 64927789 (+)
G427123 NA non-coding upstream 206231 64711678 ~ 64722880 (+)
G427157 NA non-coding upstream 219341 64708978 ~ 64709770 (+)
G427121 NA non-coding upstream 222487 64701909 ~ 64706624 (+)
G427529 NA non-coding downstream 119010 65048334 ~ 65048632 (+)
G427531 tmigd2 non-coding downstream 121417 65050741 ~ 65051118 (+)
G427563 NA non-coding downstream 184426 65113750 ~ 65128405 (+)
G427626 NA non-coding downstream 294828 65224152 ~ 65224364 (+)
LOC110522985 NA other upstream 684582 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 749725 64177028 ~ 64183138 (+)
nfil3-4 LOC106614010 other upstream 1244872 63676409 ~ 63684848 (+)
G425224 NA other upstream 1877581 63045090 ~ 63051530 (+)
LOC110524265 LOC106613745 other upstream 2622174 62283054 ~ 62327772 (+)
G427476 NA other downstream 62777 64992101 ~ 64997138 (+)
G427747 NA other downstream 524532 65453856 ~ 65521380 (+)
G428696 NA other downstream 1212755 66142079 ~ 66142605 (+)
G429156 NA other downstream 2052625 66981949 ~ 67048164 (+)

Expression


Co-expression Network